Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCF4P15884 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.48■□□□□ 0.87
TCF4P15884 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.48■□□□□ 0.87
TCF4P15884 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCF4P15884 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TCF4P15884 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCF4P15884 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.47■□□□□ 0.87
TCF4P15884 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TCF4P15884 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 ID1-201ENST00000376105 1233 ntBASIC20.47■□□□□ 0.87
TCF4P15884 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.47■□□□□ 0.87
TCF4P15884 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.47■□□□□ 0.87
TCF4P15884 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.47■□□□□ 0.87
TCF4P15884 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TCF4P15884 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.47■□□□□ 0.87
TCF4P15884 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCF4P15884 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TCF4P15884 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TCF4P15884 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.46■□□□□ 0.87
TCF4P15884 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.46■□□□□ 0.87
TCF4P15884 AC098818.2-201ENST00000564925 2320 ntBASIC20.46■□□□□ 0.87
TCF4P15884 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TCF4P15884 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.46■□□□□ 0.87
TCF4P15884 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.46■□□□□ 0.87
TCF4P15884 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.46■□□□□ 0.87
TCF4P15884 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.46■□□□□ 0.87
TCF4P15884 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.46■□□□□ 0.87
TCF4P15884 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TCF4P15884 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TCF4P15884 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.46■□□□□ 0.87
TCF4P15884 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TCF4P15884 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TCF4P15884 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.46■□□□□ 0.87
TCF4P15884 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.45■□□□□ 0.86
TCF4P15884 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TCF4P15884 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TCF4P15884 AC120498.8-201ENST00000614275 531 ntBASIC20.45■□□□□ 0.86
TCF4P15884 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 AL032819.2-201ENST00000624543 2162 ntBASIC20.45■□□□□ 0.86
TCF4P15884 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCF4P15884 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TCF4P15884 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.44■□□□□ 0.86
TCF4P15884 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TCF4P15884 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.44■□□□□ 0.86
TCF4P15884 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.44■□□□□ 0.86
TCF4P15884 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.44■□□□□ 0.86
TCF4P15884 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.44■□□□□ 0.86
TCF4P15884 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.44■□□□□ 0.86
TCF4P15884 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCF4P15884 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCF4P15884 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCF4P15884 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TCF4P15884 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCF4P15884 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCF4P15884 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.43■□□□□ 0.86
TCF4P15884 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms