Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEFMP07197 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
NEFMP07197 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC26.18■■□□□ 1.78
NEFMP07197 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
NEFMP07197 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEFMP07197 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEFMP07197 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEFMP07197 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEFMP07197 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NEFMP07197 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NEFMP07197 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NEFMP07197 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC26.17■■□□□ 1.78
NEFMP07197 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC26.17■■□□□ 1.78
NEFMP07197 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.17■■□□□ 1.78
NEFMP07197 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
NEFMP07197 AP006587.1-201ENST00000534129 1502 ntBASIC26.17■■□□□ 1.78
NEFMP07197 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
NEFMP07197 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NEFMP07197 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
NEFMP07197 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NEFMP07197 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.16■■□□□ 1.78
NEFMP07197 LINC01006-201ENST00000333319 2292 ntBASIC26.16■■□□□ 1.78
NEFMP07197 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
NEFMP07197 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NEFMP07197 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
NEFMP07197 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NEFMP07197 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.16■■□□□ 1.78
NEFMP07197 AC093827.2-201ENST00000512654 315 ntBASIC26.16■■□□□ 1.78
NEFMP07197 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NEFMP07197 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.16■■□□□ 1.78
NEFMP07197 GOLGA2P11-201ENST00000562660 1621 ntBASIC26.16■■□□□ 1.78
NEFMP07197 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC26.16■■□□□ 1.78
NEFMP07197 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
NEFMP07197 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
NEFMP07197 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NEFMP07197 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
NEFMP07197 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NEFMP07197 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
NEFMP07197 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC26.15■■□□□ 1.78
NEFMP07197 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC26.15■■□□□ 1.78
NEFMP07197 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
NEFMP07197 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.15■■□□□ 1.78
NEFMP07197 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
NEFMP07197 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC26.15■■□□□ 1.78
NEFMP07197 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC26.15■■□□□ 1.78
NEFMP07197 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
NEFMP07197 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
NEFMP07197 MIR718-201ENST00000390190 70 ntBASIC26.15■■□□□ 1.78
NEFMP07197 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.15■■□□□ 1.78
NEFMP07197 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.15■■□□□ 1.78
NEFMP07197 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.15■■□□□ 1.78
NEFMP07197 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NEFMP07197 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC26.15■■□□□ 1.78
NEFMP07197 AL162377.1-201ENST00000618844 1793 ntBASIC26.15■■□□□ 1.78
NEFMP07197 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
NEFMP07197 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.15■■□□□ 1.78
NEFMP07197 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.14■■□□□ 1.78
NEFMP07197 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
NEFMP07197 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
NEFMP07197 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC26.14■■□□□ 1.78
NEFMP07197 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NEFMP07197 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC26.14■■□□□ 1.78
NEFMP07197 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NEFMP07197 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.14■■□□□ 1.78
NEFMP07197 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.14■■□□□ 1.78
NEFMP07197 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.14■■□□□ 1.78
NEFMP07197 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.14■■□□□ 1.78
NEFMP07197 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.14■■□□□ 1.78
NEFMP07197 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.14■■□□□ 1.78
NEFMP07197 TFP1-202ENST00000475455 1573 ntBASIC26.14■■□□□ 1.78
NEFMP07197 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
NEFMP07197 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NEFMP07197 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
NEFMP07197 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.14■■□□□ 1.77
NEFMP07197 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.77
NEFMP07197 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
NEFMP07197 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NEFMP07197 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NEFMP07197 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC26.13■■□□□ 1.77
NEFMP07197 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NEFMP07197 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NEFMP07197 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NEFMP07197 KRT16P5-201ENST00000455284 522 ntBASIC26.13■■□□□ 1.77
NEFMP07197 AC008550.1-201ENST00000511500 884 ntBASIC26.13■■□□□ 1.77
NEFMP07197 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC26.13■■□□□ 1.77
NEFMP07197 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
NEFMP07197 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.13■■□□□ 1.77
NEFMP07197 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.13■■□□□ 1.77
NEFMP07197 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NEFMP07197 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NEFMP07197 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NEFMP07197 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NEFMP07197 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC26.13■■□□□ 1.77
NEFMP07197 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
NEFMP07197 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NEFMP07197 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NEFMP07197 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NEFMP07197 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NEFMP07197 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
NEFMP07197 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms