Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA3A0PJX4 AL031598.1-201ENST00000561511 1773 ntBASIC17.12■□□□□ 0.33
SHISA3A0PJX4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 AC079598.2-202ENST00000546624 1451 ntBASIC17.12■□□□□ 0.33
SHISA3A0PJX4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 AC141586.3-201ENST00000562166 1838 ntBASIC17.12■□□□□ 0.33
SHISA3A0PJX4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA3A0PJX4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 FP475955.4-201ENST00000623131 1990 ntBASIC17.11■□□□□ 0.33
SHISA3A0PJX4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 BICD1-207ENST00000551848 1962 ntBASIC17.11■□□□□ 0.33
SHISA3A0PJX4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA3A0PJX4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 KRT8P20-201ENST00000423953 1409 ntBASIC17.1■□□□□ 0.33
SHISA3A0PJX4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA3A0PJX4 AL354751.1-201ENST00000412768 1863 ntBASIC17.1■□□□□ 0.33
SHISA3A0PJX4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms