Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 AC097381.1-201ENST00000429019 1296 ntBASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-1A0A0B4J241 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-1A0A0B4J241 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 AL356652.1-201ENST00000615962 565 ntBASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRAV13-1A0A0B4J241 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms