Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 NANOGP3-201ENST00000605855 286 ntBASIC6.97□□□□□ -1.29
RGPD3A6NKT7 AC019193.2-201ENST00000610012 634 ntBASIC6.97□□□□□ -1.29
RGPD3A6NKT7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 NXF4-202ENST00000416098 1465 ntBASIC6.97□□□□□ -1.29
RGPD3A6NKT7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.97□□□□□ -1.29
RGPD3A6NKT7 AL162456.1-201ENST00000634535 2006 ntBASIC6.96□□□□□ -1.29
RGPD3A6NKT7 SDAD1P1-202ENST00000524156 2051 ntBASIC6.96□□□□□ -1.29
RGPD3A6NKT7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
RGPD3A6NKT7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.29
RGPD3A6NKT7 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
RGPD3A6NKT7 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.96□□□□□ -1.29
RGPD3A6NKT7 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RGPD3A6NKT7 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 AC092570.3-201ENST00000420113 693 ntBASIC6.96□□□□□ -1.3
RGPD3A6NKT7 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 IRF5P1-201ENST00000504852 2164 ntBASIC6.96□□□□□ -1.3
RGPD3A6NKT7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 AC018558.5-201ENST00000565840 952 ntBASIC6.96□□□□□ -1.3
RGPD3A6NKT7 AC005224.3-201ENST00000584683 2140 ntBASIC6.96□□□□□ -1.3
RGPD3A6NKT7 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 AC099494.2-201ENST00000623371 978 ntBASIC6.96□□□□□ -1.3
RGPD3A6NKT7 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 AC007998.4-201ENST00000612496 2533 ntBASIC6.96□□□□□ -1.3
RGPD3A6NKT7 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RGPD3A6NKT7 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 RNA5SP251-201ENST00000410614 137 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AL731534.1-201ENST00000434711 269 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 snoU13.20-201ENST00000459180 104 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 RN7SKP21-201ENST00000516503 220 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AC060766.1-201ENST00000590824 627 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AL353763.1-201ENST00000624467 1628 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 RNA5SP479-201ENST00000364858 117 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 RSL24D1P6-201ENST00000426934 401 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 CNOT7P1-201ENST00000429006 852 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 TMEM183AP1-205ENST00000432739 290 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 NDUFA5P8-201ENST00000449019 346 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 MIR2117-201ENST00000516780 80 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 SCARNA16.4-201ENST00000516956 187 ntBASIC6.95□□□□□ -1.3
RGPD3A6NKT7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RGPD3A6NKT7 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms