RNA–Protein interactions for RNA: ENST00000560586.1

AC087477.4-201, humanhuman

TSL 4 BASIC

Gene AC087477.4, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.4-201ENST00000560586 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
AC087477.4-201ENST00000560586 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
AC087477.4-201ENST00000560586 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
AC087477.4-201ENST00000560586 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
AC087477.4-201ENST00000560586 FOXD1Q16676 465 aa19.53■□□□□ 0.72
AC087477.4-201ENST00000560586 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
AC087477.4-201ENST00000560586 MSH5O43196 834 aa18.52■□□□□ 0.56
AC087477.4-201ENST00000560586 PIAS4Q8N2W9 510 aaPredicted RBP18.19■□□□□ 0.5
AC087477.4-201ENST00000560586 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
AC087477.4-201ENST00000560586 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
AC087477.4-201ENST00000560586 ADRA2BP18089 450 aa17.84■□□□□ 0.45
AC087477.4-201ENST00000560586 DMRT2Q9Y5R5 561 aa16.52■□□□□ 0.24
AC087477.4-201ENST00000560586 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
AC087477.4-201ENST00000560586 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
AC087477.4-201ENST00000560586 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
AC087477.4-201ENST00000560586 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
AC087477.4-201ENST00000560586 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
AC087477.4-201ENST00000560586 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
AC087477.4-201ENST00000560586 RNF39Q9H2S5 420 aa15.73■□□□□ 0.11
AC087477.4-201ENST00000560586 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
AC087477.4-201ENST00000560586 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.08
AC087477.4-201ENST00000560586 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
AC087477.4-201ENST00000560586 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
AC087477.4-201ENST00000560586 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ -0
AC087477.4-201ENST00000560586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
AC087477.4-201ENST00000560586 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
AC087477.4-201ENST00000560586 POTEHQ6S545 545 aa14.64□□□□□ -0.07
AC087477.4-201ENST00000560586 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
AC087477.4-201ENST00000560586 CAPN15O75808 1086 aa14.6□□□□□ -0.07
AC087477.4-201ENST00000560586 DSG3P32926 999 aa14.57□□□□□ -0.08
AC087477.4-201ENST00000560586 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
AC087477.4-201ENST00000560586 APLP2Q06481 763 aa14.28□□□□□ -0.12
AC087477.4-201ENST00000560586 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
AC087477.4-201ENST00000560586 ZNF219Q9P2Y4 722 aaPredicted RBP14.23□□□□□ -0.13
AC087477.4-201ENST00000560586 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
AC087477.4-201ENST00000560586 ABCB7O75027 752 aa14.18□□□□□ -0.14
AC087477.4-201ENST00000560586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
AC087477.4-201ENST00000560586 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
AC087477.4-201ENST00000560586 KCNA4P22459 653 aa14.08□□□□□ -0.16
AC087477.4-201ENST00000560586 SAMD1Q6SPF0 538 aaPredicted RBP14.02□□□□□ -0.17
AC087477.4-201ENST00000560586 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
AC087477.4-201ENST00000560586 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
AC087477.4-201ENST00000560586 POLA2Q14181 598 aa13.75□□□□□ -0.21
AC087477.4-201ENST00000560586 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
AC087477.4-201ENST00000560586 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
AC087477.4-201ENST00000560586 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
AC087477.4-201ENST00000560586 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
AC087477.4-201ENST00000560586 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
AC087477.4-201ENST00000560586 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
AC087477.4-201ENST00000560586 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
AC087477.4-201ENST00000560586 OSCARQ8IYS5 282 aa13.32□□□□□ -0.28
AC087477.4-201ENST00000560586 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
AC087477.4-201ENST00000560586 HAX1O00165 279 aa13.29□□□□□ -0.28
AC087477.4-201ENST00000560586 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
AC087477.4-201ENST00000560586 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
AC087477.4-201ENST00000560586 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
AC087477.4-201ENST00000560586 EVX2Q03828 476 aa13.01□□□□□ -0.33
AC087477.4-201ENST00000560586 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
AC087477.4-201ENST00000560586 SPDYE6P0CI01 402 aa13□□□□□ -0.33
AC087477.4-201ENST00000560586 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
AC087477.4-201ENST00000560586 ATXN8OSP0DMR3 200 aa12.96□□□□□ -0.33
AC087477.4-201ENST00000560586 FBLN2P98095 1184 aa12.96□□□□□ -0.33
AC087477.4-201ENST00000560586 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
AC087477.4-201ENST00000560586 ZBTB22O15209 634 aa12.9□□□□□ -0.34
AC087477.4-201ENST00000560586 SPDYE1Q8NFV5 336 aaPredicted RBP12.9□□□□□ -0.34
AC087477.4-201ENST00000560586 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
AC087477.4-201ENST00000560586 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
AC087477.4-201ENST00000560586 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
AC087477.4-201ENST00000560586 NISCHQ9Y2I1 1504 aa12.76□□□□□ -0.37
AC087477.4-201ENST00000560586 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
AC087477.4-201ENST00000560586 GABBR2O75899 941 aa12.74□□□□□ -0.37
AC087477.4-201ENST00000560586 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
AC087477.4-201ENST00000560586 LHX8Q68G74 356 aa12.69□□□□□ -0.38
AC087477.4-201ENST00000560586 CHADLQ6NUI6 762 aa12.66□□□□□ -0.38
AC087477.4-201ENST00000560586 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
AC087477.4-201ENST00000560586 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
AC087477.4-201ENST00000560586 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
AC087477.4-201ENST00000560586 CLCN6P51797 869 aa12.45□□□□□ -0.42
AC087477.4-201ENST00000560586 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
AC087477.4-201ENST00000560586 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
AC087477.4-201ENST00000560586 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
AC087477.4-201ENST00000560586 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
AC087477.4-201ENST00000560586 PLSCR2Q9NRY7 297 aa12.26□□□□□ -0.45
AC087477.4-201ENST00000560586 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
AC087477.4-201ENST00000560586 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
AC087477.4-201ENST00000560586 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
AC087477.4-201ENST00000560586 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
AC087477.4-201ENST00000560586 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
AC087477.4-201ENST00000560586 OTUD5Q96G74 571 aa12.07□□□□□ -0.48
AC087477.4-201ENST00000560586 PHF12Q96QT6 1004 aa12.01□□□□□ -0.49
AC087477.4-201ENST00000560586 POTEB2H3BUK9 544 aa12□□□□□ -0.49
AC087477.4-201ENST00000560586 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC087477.4-201ENST00000560586 POTEMA6NI47 508 aa11.97□□□□□ -0.49
AC087477.4-201ENST00000560586 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
AC087477.4-201ENST00000560586 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
AC087477.4-201ENST00000560586 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
AC087477.4-201ENST00000560586 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
AC087477.4-201ENST00000560586 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
AC087477.4-201ENST00000560586 MNX1P50219 401 aaPredicted RBP11.86□□□□□ -0.51
AC087477.4-201ENST00000560586 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms