RNA–Protein interactions for RNA: ENST00000359008.8

VTCN1-202, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VTCN1, Length 2,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-202ENST00000359008 SLC24A1O60721 1099 aa14.08□□□□□ -0.16
VTCN1-202ENST00000359008 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
VTCN1-202ENST00000359008 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
VTCN1-202ENST00000359008 NISCHQ9Y2I1 1504 aa13.07□□□□□ -0.32
VTCN1-202ENST00000359008 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
VTCN1-202ENST00000359008 PLPPR3Q6T4P5 718 aa12.85□□□□□ -0.35
VTCN1-202ENST00000359008 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.36
VTCN1-202ENST00000359008 DAXXQ9UER7 740 aaPredicted RBP12.65□□□□□ -0.39
VTCN1-202ENST00000359008 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
VTCN1-202ENST00000359008 PHF23Q9BUL5 403 aaPredicted RBP12.53□□□□□ -0.4
VTCN1-202ENST00000359008 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
VTCN1-202ENST00000359008 KCNA4P22459 653 aa12.4□□□□□ -0.42
VTCN1-202ENST00000359008 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
VTCN1-202ENST00000359008 PRKCSHP14314 528 aaPredicted RBP12.17□□□□□ -0.46
VTCN1-202ENST00000359008 ARXQ96QS3 562 aa12□□□□□ -0.49
VTCN1-202ENST00000359008 TIMELESSQ9UNS1 1208 aa11.91□□□□□ -0.5
VTCN1-202ENST00000359008 APLP2Q06481 763 aa11.84□□□□□ -0.51
VTCN1-202ENST00000359008 TTBK1Q5TCY1 1321 aaPredicted RBP11.84□□□□□ -0.51
VTCN1-202ENST00000359008 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
VTCN1-202ENST00000359008 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
VTCN1-202ENST00000359008 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
VTCN1-202ENST00000359008 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
VTCN1-202ENST00000359008 BCANQ96GW7 911 aa11.69□□□□□ -0.54
VTCN1-202ENST00000359008 MYT1Q01538 1121 aa11.67□□□□□ -0.54
VTCN1-202ENST00000359008 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
VTCN1-202ENST00000359008 HOMEZQ8IX15 550 aa11.63□□□□□ -0.55
VTCN1-202ENST00000359008 RANGAP1P46060 587 aaPredicted RBP11.62□□□□□ -0.55
VTCN1-202ENST00000359008 TPRNQ4KMQ1 711 aa11.61□□□□□ -0.55
VTCN1-202ENST00000359008 SHROOM4Q9ULL8 1493 aa11.52□□□□□ -0.57
VTCN1-202ENST00000359008 PLCB2Q00722 1185 aa11.52□□□□□ -0.57
VTCN1-202ENST00000359008 HRCP23327 699 aa11.46□□□□□ -0.57
VTCN1-202ENST00000359008 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
VTCN1-202ENST00000359008 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
VTCN1-202ENST00000359008 CCDC180Q9P1Z9 1646 aa11.4□□□□□ -0.58
VTCN1-202ENST00000359008 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
VTCN1-202ENST00000359008 HAP1P54257 671 aaPredicted RBP11.39□□□□□ -0.59
VTCN1-202ENST00000359008 PODXL2Q9NZ53 605 aa11.37□□□□□ -0.59
VTCN1-202ENST00000359008 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
VTCN1-202ENST00000359008 ZBTB22O15209 634 aa11.35□□□□□ -0.59
VTCN1-202ENST00000359008 PCGF6Q9BYE7 350 aa11.35□□□□□ -0.59
VTCN1-202ENST00000359008 ADRA2BP18089 450 aa11.31□□□□□ -0.6
VTCN1-202ENST00000359008 MYO15BQ96JP2 1530 aa11.29□□□□□ -0.6
VTCN1-202ENST00000359008 TMEM132AQ24JP5 1023 aa11.15□□□□□ -0.63
VTCN1-202ENST00000359008 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
VTCN1-202ENST00000359008 EIF5BO60841 1220 aaKnown RBP11.11□□□□□ -0.63
VTCN1-202ENST00000359008 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
VTCN1-202ENST00000359008 DCAF8L2P0C7V8 631 aa11.09□□□□□ -0.63
VTCN1-202ENST00000359008 FKBP8Q14318 412 aa11.09□□□□□ -0.63
VTCN1-202ENST00000359008 C14orf37Q86TY3 774 aa11.06□□□□□ -0.64
VTCN1-202ENST00000359008 KDM2AQ9Y2K7 1162 aa11.01□□□□□ -0.65
VTCN1-202ENST00000359008 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
VTCN1-202ENST00000359008 NPM3O75607 178 aaKnown RBP10.96□□□□□ -0.66
VTCN1-202ENST00000359008 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
VTCN1-202ENST00000359008 ZCCHC6Q5VYS8 1495 aaKnown RBP10.94□□□□□ -0.66
VTCN1-202ENST00000359008 SCAF1Q9H7N4 1312 aaKnown RBP10.93□□□□□ -0.66
VTCN1-202ENST00000359008 ABCC9O60706 1549 aa10.93□□□□□ -0.66
VTCN1-202ENST00000359008 FBLN2P98095 1184 aa10.9□□□□□ -0.66
VTCN1-202ENST00000359008 TRIM26Q12899 539 aaPredicted RBP10.9□□□□□ -0.66
VTCN1-202ENST00000359008 DCAF1Q9Y4B6 1507 aa10.86□□□□□ -0.67
VTCN1-202ENST00000359008 UBTFP17480 764 aaKnown RBP10.77□□□□□ -0.69
VTCN1-202ENST00000359008 PPP4R3CPQ6ZMV5 832 aa10.72□□□□□ -0.69
VTCN1-202ENST00000359008 PLEKHG5O94827 1062 aa10.7□□□□□ -0.7
VTCN1-202ENST00000359008 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
VTCN1-202ENST00000359008 ZEB1P37275 1124 aaPredicted RBP10.65□□□□□ -0.7
VTCN1-202ENST00000359008 NEUROD1Q13562 356 aa10.64□□□□□ -0.71
VTCN1-202ENST00000359008 SENP3Q9H4L4 574 aaPredicted RBP10.63□□□□□ -0.71
VTCN1-202ENST00000359008 PPP6R1Q9UPN7 881 aa10.63□□□□□ -0.71
VTCN1-202ENST00000359008 FAM9AQ8IZU1 332 aaPredicted RBP10.63□□□□□ -0.71
VTCN1-202ENST00000359008 NACADO15069 1562 aa10.6□□□□□ -0.71
VTCN1-202ENST00000359008 ACIN1Q9UKV3 1341 aaKnown RBP10.59□□□□□ -0.71
VTCN1-202ENST00000359008 NBR1Q14596 966 aa10.55□□□□□ -0.72
VTCN1-202ENST00000359008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
VTCN1-202ENST00000359008 RB1CC1Q8TDY2 1594 aa10.53□□□□□ -0.72
VTCN1-202ENST00000359008 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
VTCN1-202ENST00000359008 SCRIBQ14160 1630 aa10.5□□□□□ -0.73
VTCN1-202ENST00000359008 CFAP44Q96MT7 982 aa10.48□□□□□ -0.73
VTCN1-202ENST00000359008 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
VTCN1-202ENST00000359008 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.74
VTCN1-202ENST00000359008 CCER1Q8TC90 406 aaPredicted RBP10.45□□□□□ -0.74
VTCN1-202ENST00000359008 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
VTCN1-202ENST00000359008 DIEXFQ68CQ4 756 aaKnown RBP10.43□□□□□ -0.74
VTCN1-202ENST00000359008 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
VTCN1-202ENST00000359008 CENPBP07199 599 aaPredicted RBP10.41□□□□□ -0.74
VTCN1-202ENST00000359008 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
VTCN1-202ENST00000359008 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
VTCN1-202ENST00000359008 CCDC9Q9Y3X0 531 aaKnown RBP10.36□□□□□ -0.75
VTCN1-202ENST00000359008 CHMP4AQ9BY43 222 aa10.35□□□□□ -0.75
VTCN1-202ENST00000359008 IGSF3O75054 1194 aa10.34□□□□□ -0.75
VTCN1-202ENST00000359008 CDK11BP21127 795 aaKnown RBP10.34□□□□□ -0.75
VTCN1-202ENST00000359008 CDK11AQ9UQ88 783 aaPredicted RBP10.34□□□□□ -0.75
VTCN1-202ENST00000359008 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
VTCN1-202ENST00000359008 PKD2Q13563 968 aa10.34□□□□□ -0.75
VTCN1-202ENST00000359008 PDIA4P13667 645 aaKnown RBP10.3□□□□□ -0.76
VTCN1-202ENST00000359008 CNKSR2Q8WXI2 1034 aa10.28□□□□□ -0.76
VTCN1-202ENST00000359008 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
VTCN1-202ENST00000359008 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
VTCN1-202ENST00000359008 RSF1Q96T23 1441 aaPredicted RBP10.25□□□□□ -0.77
VTCN1-202ENST00000359008 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
VTCN1-202ENST00000359008 CECR2Q9BXF3 1484 aa10.23□□□□□ -0.77
VTCN1-202ENST00000359008 TRHP20396 242 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms