RNA–Protein interactions for RNA: ENST00000628396.1

CASC22-202, Transcript of cancer susceptibility 22, humanhuman

TSL 5 BASIC

Gene CASC22, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC22-202ENST00000628396 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
CASC22-202ENST00000628396 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
CASC22-202ENST00000628396 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
CASC22-202ENST00000628396 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
CASC22-202ENST00000628396 FOXD1Q16676 465 aa19.61■□□□□ 0.73
CASC22-202ENST00000628396 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
CASC22-202ENST00000628396 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
CASC22-202ENST00000628396 MSH5O43196 834 aa18.37■□□□□ 0.53
CASC22-202ENST00000628396 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
CASC22-202ENST00000628396 ADRA2BP18089 450 aa18.34■□□□□ 0.53
CASC22-202ENST00000628396 POTEDQ86YR6 584 aa17.87■□□□□ 0.45
CASC22-202ENST00000628396 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
CASC22-202ENST00000628396 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
CASC22-202ENST00000628396 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
CASC22-202ENST00000628396 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
CASC22-202ENST00000628396 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
CASC22-202ENST00000628396 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
CASC22-202ENST00000628396 HOXD11P31277 338 aaPredicted RBP16.06■□□□□ 0.16
CASC22-202ENST00000628396 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
CASC22-202ENST00000628396 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
CASC22-202ENST00000628396 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
CASC22-202ENST00000628396 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
CASC22-202ENST00000628396 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
CASC22-202ENST00000628396 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
CASC22-202ENST00000628396 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
CASC22-202ENST00000628396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.06
CASC22-202ENST00000628396 KCNA4P22459 653 aa15.38■□□□□ 0.05
CASC22-202ENST00000628396 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
CASC22-202ENST00000628396 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
CASC22-202ENST00000628396 CAPN15O75808 1086 aa14.85□□□□□ -0.03
CASC22-202ENST00000628396 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
CASC22-202ENST00000628396 DSG3P32926 999 aa14.67□□□□□ -0.06
CASC22-202ENST00000628396 APLP2Q06481 763 aa14.67□□□□□ -0.06
CASC22-202ENST00000628396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
CASC22-202ENST00000628396 HNRNPUL2Q1KMD3 747 aaKnown RBP14.64□□□□□ -0.07
CASC22-202ENST00000628396 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
CASC22-202ENST00000628396 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
CASC22-202ENST00000628396 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
CASC22-202ENST00000628396 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
CASC22-202ENST00000628396 ABCB7O75027 752 aa14.49□□□□□ -0.09
CASC22-202ENST00000628396 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
CASC22-202ENST00000628396 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
CASC22-202ENST00000628396 POLA2Q14181 598 aa14.2□□□□□ -0.14
CASC22-202ENST00000628396 ZBTB22O15209 634 aa14.15□□□□□ -0.14
CASC22-202ENST00000628396 ATF5Q9Y2D1 282 aaPredicted RBP14.08□□□□□ -0.16
CASC22-202ENST00000628396 POTEHQ6S545 545 aa14.03□□□□□ -0.16
CASC22-202ENST00000628396 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
CASC22-202ENST00000628396 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
CASC22-202ENST00000628396 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
CASC22-202ENST00000628396 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
CASC22-202ENST00000628396 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
CASC22-202ENST00000628396 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
CASC22-202ENST00000628396 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
CASC22-202ENST00000628396 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
CASC22-202ENST00000628396 FBLN2P98095 1184 aa13.61□□□□□ -0.23
CASC22-202ENST00000628396 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
CASC22-202ENST00000628396 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
CASC22-202ENST00000628396 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
CASC22-202ENST00000628396 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
CASC22-202ENST00000628396 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
CASC22-202ENST00000628396 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
CASC22-202ENST00000628396 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
CASC22-202ENST00000628396 ZNF692Q9BU19 519 aaPredicted RBP13.36□□□□□ -0.27
CASC22-202ENST00000628396 NISCHQ9Y2I1 1504 aa13.3□□□□□ -0.28
CASC22-202ENST00000628396 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.28
CASC22-202ENST00000628396 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
CASC22-202ENST00000628396 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
CASC22-202ENST00000628396 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
CASC22-202ENST00000628396 HAX1O00165 279 aa13.2□□□□□ -0.3
CASC22-202ENST00000628396 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
CASC22-202ENST00000628396 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
CASC22-202ENST00000628396 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
CASC22-202ENST00000628396 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
CASC22-202ENST00000628396 CHADLQ6NUI6 762 aa12.98□□□□□ -0.33
CASC22-202ENST00000628396 EVX2Q03828 476 aa12.96□□□□□ -0.33
CASC22-202ENST00000628396 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
CASC22-202ENST00000628396 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
CASC22-202ENST00000628396 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
CASC22-202ENST00000628396 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
CASC22-202ENST00000628396 GABBR2O75899 941 aa12.7□□□□□ -0.38
CASC22-202ENST00000628396 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
CASC22-202ENST00000628396 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
CASC22-202ENST00000628396 PROM2Q8N271 834 aa12.6□□□□□ -0.39
CASC22-202ENST00000628396 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
CASC22-202ENST00000628396 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
CASC22-202ENST00000628396 CLCN6P51797 869 aa12.49□□□□□ -0.41
CASC22-202ENST00000628396 FKBP8Q14318 412 aa12.49□□□□□ -0.41
CASC22-202ENST00000628396 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
CASC22-202ENST00000628396 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
CASC22-202ENST00000628396 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
CASC22-202ENST00000628396 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
CASC22-202ENST00000628396 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
CASC22-202ENST00000628396 LHX8Q68G74 356 aa12.37□□□□□ -0.43
CASC22-202ENST00000628396 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
CASC22-202ENST00000628396 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
CASC22-202ENST00000628396 MIER1Q8N108 512 aa12.33□□□□□ -0.44
CASC22-202ENST00000628396 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
CASC22-202ENST00000628396 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
CASC22-202ENST00000628396 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
CASC22-202ENST00000628396 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms