RNA–Protein interactions for RNA: ENST00000621536.4

FGF1-216, Transcript of fibroblast growth factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGF1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGF1-216ENST00000621536 NISCHQ9Y2I1 1504 aa13.01□□□□□ -0.33
FGF1-216ENST00000621536 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
FGF1-216ENST00000621536 CCDC180Q9P1Z9 1646 aa11.39□□□□□ -0.59
FGF1-216ENST00000621536 ZCCHC6Q5VYS8 1495 aaKnown RBP10.97□□□□□ -0.65
FGF1-216ENST00000621536 SUPT5HO00267 1087 aaKnown RBP10.94□□□□□ -0.66
FGF1-216ENST00000621536 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
FGF1-216ENST00000621536 DCAF1Q9Y4B6 1507 aa10.79□□□□□ -0.68
FGF1-216ENST00000621536 MYO15BQ96JP2 1530 aa10.67□□□□□ -0.7
FGF1-216ENST00000621536 ABCC9O60706 1549 aa10.64□□□□□ -0.71
FGF1-216ENST00000621536 UNC13AQ9UPW8 1703 aa10.53□□□□□ -0.72
FGF1-216ENST00000621536 NACADO15069 1562 aa10.51□□□□□ -0.73
FGF1-216ENST00000621536 MYT1Q01538 1121 aa10.45□□□□□ -0.74
FGF1-216ENST00000621536 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
FGF1-216ENST00000621536 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
FGF1-216ENST00000621536 SCRIBQ14160 1630 aa10.41□□□□□ -0.74
FGF1-216ENST00000621536 RB1CC1Q8TDY2 1594 aa10.38□□□□□ -0.75
FGF1-216ENST00000621536 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
FGF1-216ENST00000621536 FAM9AQ8IZU1 332 aaPredicted RBP10.26□□□□□ -0.77
FGF1-216ENST00000621536 PELP1Q8IZL8 1130 aaKnown RBP10.21□□□□□ -0.77
FGF1-216ENST00000621536 CECR2Q9BXF3 1484 aa10.17□□□□□ -0.78
FGF1-216ENST00000621536 TRIM41Q8WV44 630 aa10.15□□□□□ -0.79
FGF1-216ENST00000621536 MROH2BQ7Z745 1585 aa10.1□□□□□ -0.79
FGF1-216ENST00000621536 RSF1Q96T23 1441 aaPredicted RBP10.08□□□□□ -0.8
FGF1-216ENST00000621536 APLP2Q06481 763 aa10.06□□□□□ -0.8
FGF1-216ENST00000621536 WIZO95785 1651 aa10.04□□□□□ -0.8
FGF1-216ENST00000621536 SMARCA4P51532 1647 aa10.03□□□□□ -0.8
FGF1-216ENST00000621536 PCGF6Q9BYE7 350 aa10.03□□□□□ -0.8
FGF1-216ENST00000621536 TTBK1Q5TCY1 1321 aaPredicted RBP10.02□□□□□ -0.81
FGF1-216ENST00000621536 ERICH6Q7L0X2 663 aa10.01□□□□□ -0.81
FGF1-216ENST00000621536 PEG3Q9GZU2 1588 aa9.99□□□□□ -0.81
FGF1-216ENST00000621536 RANGAP1P46060 587 aaPredicted RBP9.99□□□□□ -0.81
FGF1-216ENST00000621536 PABPN1Q86U42 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
FGF1-216ENST00000621536 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
FGF1-216ENST00000621536 CHIC1Q5VXU3 224 aa9.94□□□□□ -0.82
FGF1-216ENST00000621536 UBTFP17480 764 aaKnown RBP9.93□□□□□ -0.82
FGF1-216ENST00000621536 EIF4G1Q04637 1599 aaKnown RBP9.93□□□□□ -0.82
FGF1-216ENST00000621536 LOC105371045A0A1W2PR82 267 aa9.84□□□□□ -0.83
FGF1-216ENST00000621536 TOP2AP11388 1531 aaKnown RBP9.84□□□□□ -0.83
FGF1-216ENST00000621536 ATAD2BQ9ULI0 1458 aa9.83□□□□□ -0.84
FGF1-216ENST00000621536 SMARCA2P51531 1590 aa9.82□□□□□ -0.84
FGF1-216ENST00000621536 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
FGF1-216ENST00000621536 PPARGC1BQ86YN6 1023 aaKnown RBP9.8□□□□□ -0.84
FGF1-216ENST00000621536 CC2D2AQ9P2K1 1620 aa9.75□□□□□ -0.85
FGF1-216ENST00000621536 CCER1Q8TC90 406 aaPredicted RBP9.75□□□□□ -0.85
FGF1-216ENST00000621536 HMGXB3Q12766 1538 aa9.75□□□□□ -0.85
FGF1-216ENST00000621536 CCDC88BA6NC98 1476 aa9.74□□□□□ -0.85
FGF1-216ENST00000621536 NCAPD3P42695 1498 aa9.73□□□□□ -0.85
FGF1-216ENST00000621536 ZEB1P37275 1124 aaPredicted RBP9.69□□□□□ -0.86
FGF1-216ENST00000621536 TRIM26Q12899 539 aaPredicted RBP9.68□□□□□ -0.86
FGF1-216ENST00000621536 DNAJC5BQ9UF47 199 aa9.65□□□□□ -0.86
FGF1-216ENST00000621536 BAZ1BQ9UIG0 1483 aaKnown RBP9.64□□□□□ -0.87
FGF1-216ENST00000621536 PRDM2Q13029 1718 aa9.6□□□□□ -0.87
FGF1-216ENST00000621536 ABCC8Q09428 1581 aa9.57□□□□□ -0.88
FGF1-216ENST00000621536 ITGAEP38570 1179 aa9.55□□□□□ -0.88
FGF1-216ENST00000621536 HRCP23327 699 aa9.53□□□□□ -0.88
FGF1-216ENST00000621536 CFTRP13569 1480 aa9.53□□□□□ -0.88
FGF1-216ENST00000621536 HNRNPUL2Q1KMD3 747 aaKnown RBP9.53□□□□□ -0.88
FGF1-216ENST00000621536 DAXXQ9UER7 740 aaPredicted RBP9.53□□□□□ -0.88
FGF1-216ENST00000621536 SYNJ1O43426 1573 aa9.52□□□□□ -0.89
FGF1-216ENST00000621536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.52□□□□□ -0.89
FGF1-216ENST00000621536 BIVM-ERCC5R4GMW8 1640 aa9.47□□□□□ -0.89
FGF1-216ENST00000621536 NESP48681 1621 aa9.47□□□□□ -0.89
FGF1-216ENST00000621536 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
FGF1-216ENST00000621536 CUX1P39880 1505 aa9.44□□□□□ -0.9
FGF1-216ENST00000621536 CENPBP07199 599 aaPredicted RBP9.44□□□□□ -0.9
FGF1-216ENST00000621536 TOP2BQ02880 1626 aa9.43□□□□□ -0.9
FGF1-216ENST00000621536 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
FGF1-216ENST00000621536 CADPSQ9ULU8 1353 aa9.39□□□□□ -0.91
FGF1-216ENST00000621536 RUSC2Q8N2Y8 1516 aa9.39□□□□□ -0.91
FGF1-216ENST00000621536 LAMC3Q9Y6N6 1575 aa9.38□□□□□ -0.91
FGF1-216ENST00000621536 YTHDC1Q96MU7 727 aaKnown RBP9.37□□□□□ -0.91
FGF1-216ENST00000621536 WDR97A6NE52 1622 aa9.35□□□□□ -0.91
FGF1-216ENST00000621536 FAM50AQ14320 339 aaKnown RBP9.35□□□□□ -0.91
FGF1-216ENST00000621536 WRNQ14191 1432 aaPredicted RBP eCLIP9.35□□□□□ -0.91
FGF1-216ENST00000621536 MYT1LQ9UL68 1186 aa9.35□□□□□ -0.91
FGF1-216ENST00000621536 FBLN2P98095 1184 aa9.34□□□□□ -0.91
FGF1-216ENST00000621536 SOGA1O94964 1423 aa9.34□□□□□ -0.91
FGF1-216ENST00000621536 P3H3Q8IVL6 736 aa9.33□□□□□ -0.92
FGF1-216ENST00000621536 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
FGF1-216ENST00000621536 EIF5BO60841 1220 aaKnown RBP9.33□□□□□ -0.92
FGF1-216ENST00000621536 FANCD2Q9BXW9 1451 aa9.31□□□□□ -0.92
FGF1-216ENST00000621536 THOC2Q8NI27 1593 aaKnown RBP9.29□□□□□ -0.92
FGF1-216ENST00000621536 PRKCSHP14314 528 aaPredicted RBP9.28□□□□□ -0.92
FGF1-216ENST00000621536 DNMBPQ6XZF7 1577 aa9.28□□□□□ -0.92
FGF1-216ENST00000621536 TARBP1Q13395 1621 aaKnown RBP9.27□□□□□ -0.93
FGF1-216ENST00000621536 TOPBP1Q92547 1522 aa9.27□□□□□ -0.93
FGF1-216ENST00000621536 POLR3GLQ9BT43 218 aa9.25□□□□□ -0.93
FGF1-216ENST00000621536 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
FGF1-216ENST00000621536 RTN4Q9NQC3 1192 aaKnown RBP9.24□□□□□ -0.93
FGF1-216ENST00000621536 POLA1P09884 1462 aaPredicted RBP9.24□□□□□ -0.93
FGF1-216ENST00000621536 FGD5Q6ZNL6 1462 aa9.23□□□□□ -0.93
FGF1-216ENST00000621536 TRIM52Q96A61 297 aa9.23□□□□□ -0.93
FGF1-216ENST00000621536 WDR62O43379 1518 aa9.23□□□□□ -0.93
FGF1-216ENST00000621536 CUX2O14529 1486 aa9.23□□□□□ -0.93
FGF1-216ENST00000621536 ABCA5Q8WWZ7 1642 aa9.22□□□□□ -0.93
FGF1-216ENST00000621536 NEUROD1Q13562 356 aa9.21□□□□□ -0.93
FGF1-216ENST00000621536 DIEXFQ68CQ4 756 aaKnown RBP9.21□□□□□ -0.94
FGF1-216ENST00000621536 CEP164Q9UPV0 1460 aa9.2□□□□□ -0.94
FGF1-216ENST00000621536 KIF21BO75037 1637 aa9.2□□□□□ -0.94
FGF1-216ENST00000621536 PLPPR3Q6T4P5 718 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms