RNA–Protein interactions for RNA: ENST00000559214.1

AC087477.3-201, humanhuman

TSL 4 BASIC

Gene AC087477.3, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.3-201ENST00000559214 AEBP2Q6ZN18 517 aaPredicted RBP23.41■■□□□ 1.34
AC087477.3-201ENST00000559214 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
AC087477.3-201ENST00000559214 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
AC087477.3-201ENST00000559214 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
AC087477.3-201ENST00000559214 FOXD1Q16676 465 aa18.6■□□□□ 0.57
AC087477.3-201ENST00000559214 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
AC087477.3-201ENST00000559214 MSH5O43196 834 aa17.37■□□□□ 0.37
AC087477.3-201ENST00000559214 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
AC087477.3-201ENST00000559214 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
AC087477.3-201ENST00000559214 ADRA2BP18089 450 aa17.24■□□□□ 0.35
AC087477.3-201ENST00000559214 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
AC087477.3-201ENST00000559214 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
AC087477.3-201ENST00000559214 DMRT2Q9Y5R5 561 aa15.8■□□□□ 0.12
AC087477.3-201ENST00000559214 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
AC087477.3-201ENST00000559214 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
AC087477.3-201ENST00000559214 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
AC087477.3-201ENST00000559214 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
AC087477.3-201ENST00000559214 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
AC087477.3-201ENST00000559214 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
AC087477.3-201ENST00000559214 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
AC087477.3-201ENST00000559214 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
AC087477.3-201ENST00000559214 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
AC087477.3-201ENST00000559214 NCBP3Q53F19 620 aaKnown RBP14.72□□□□□ -0.05
AC087477.3-201ENST00000559214 C1QBPQ07021 282 aaKnown RBP14.62□□□□□ -0.07
AC087477.3-201ENST00000559214 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
AC087477.3-201ENST00000559214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.35□□□□□ -0.11
AC087477.3-201ENST00000559214 KCNA4P22459 653 aa14.23□□□□□ -0.13
AC087477.3-201ENST00000559214 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
AC087477.3-201ENST00000559214 SLC4A2P04920 1241 aa14□□□□□ -0.17
AC087477.3-201ENST00000559214 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
AC087477.3-201ENST00000559214 DSG3P32926 999 aa13.89□□□□□ -0.19
AC087477.3-201ENST00000559214 CAPN15O75808 1086 aa13.84□□□□□ -0.19
AC087477.3-201ENST00000559214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
AC087477.3-201ENST00000559214 APLP2Q06481 763 aa13.62□□□□□ -0.23
AC087477.3-201ENST00000559214 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
AC087477.3-201ENST00000559214 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
AC087477.3-201ENST00000559214 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
AC087477.3-201ENST00000559214 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
AC087477.3-201ENST00000559214 ABCB7O75027 752 aa13.54□□□□□ -0.24
AC087477.3-201ENST00000559214 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
AC087477.3-201ENST00000559214 POTEHQ6S545 545 aa13.39□□□□□ -0.27
AC087477.3-201ENST00000559214 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
AC087477.3-201ENST00000559214 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
AC087477.3-201ENST00000559214 POLA2Q14181 598 aa13.26□□□□□ -0.29
AC087477.3-201ENST00000559214 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
AC087477.3-201ENST00000559214 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
AC087477.3-201ENST00000559214 ZBTB22O15209 634 aa13.13□□□□□ -0.31
AC087477.3-201ENST00000559214 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
AC087477.3-201ENST00000559214 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
AC087477.3-201ENST00000559214 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
AC087477.3-201ENST00000559214 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
AC087477.3-201ENST00000559214 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
AC087477.3-201ENST00000559214 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
AC087477.3-201ENST00000559214 NISCHQ9Y2I1 1504 aa12.71□□□□□ -0.38
AC087477.3-201ENST00000559214 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
AC087477.3-201ENST00000559214 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
AC087477.3-201ENST00000559214 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
AC087477.3-201ENST00000559214 FXR2P51116 673 aaKnown RBP eCLIP12.6□□□□□ -0.39
AC087477.3-201ENST00000559214 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
AC087477.3-201ENST00000559214 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
AC087477.3-201ENST00000559214 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
AC087477.3-201ENST00000559214 FBLN2P98095 1184 aa12.58□□□□□ -0.4
AC087477.3-201ENST00000559214 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
AC087477.3-201ENST00000559214 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
AC087477.3-201ENST00000559214 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
AC087477.3-201ENST00000559214 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
AC087477.3-201ENST00000559214 HAX1O00165 279 aa12.37□□□□□ -0.43
AC087477.3-201ENST00000559214 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
AC087477.3-201ENST00000559214 EVX2Q03828 476 aa12.34□□□□□ -0.43
AC087477.3-201ENST00000559214 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
AC087477.3-201ENST00000559214 PRKAR2AP13861 404 aaKnown RBP12.28□□□□□ -0.44
AC087477.3-201ENST00000559214 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
AC087477.3-201ENST00000559214 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
AC087477.3-201ENST00000559214 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
AC087477.3-201ENST00000559214 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
AC087477.3-201ENST00000559214 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
AC087477.3-201ENST00000559214 GABBR2O75899 941 aa12□□□□□ -0.49
AC087477.3-201ENST00000559214 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
AC087477.3-201ENST00000559214 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
AC087477.3-201ENST00000559214 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
AC087477.3-201ENST00000559214 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
AC087477.3-201ENST00000559214 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
AC087477.3-201ENST00000559214 POTEIP0CG38 1075 aa11.81□□□□□ -0.52
AC087477.3-201ENST00000559214 CLCN6P51797 869 aa11.77□□□□□ -0.53
AC087477.3-201ENST00000559214 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
AC087477.3-201ENST00000559214 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
AC087477.3-201ENST00000559214 LHX8Q68G74 356 aa11.72□□□□□ -0.53
AC087477.3-201ENST00000559214 PROM2Q8N271 834 aa11.72□□□□□ -0.53
AC087477.3-201ENST00000559214 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
AC087477.3-201ENST00000559214 GALR2O43603 387 aaPredicted RBP11.6□□□□□ -0.55
AC087477.3-201ENST00000559214 DCBLD2Q96PD2 775 aa11.57□□□□□ -0.56
AC087477.3-201ENST00000559214 NPM1P06748 294 aaKnown RBP eCLIP11.56□□□□□ -0.56
AC087477.3-201ENST00000559214 PHF12Q96QT6 1004 aa11.55□□□□□ -0.56
AC087477.3-201ENST00000559214 PAK3O75914 559 aaPredicted RBP11.51□□□□□ -0.57
AC087477.3-201ENST00000559214 PELP1Q8IZL8 1130 aaKnown RBP11.43□□□□□ -0.58
AC087477.3-201ENST00000559214 POTEB2H3BUK9 544 aa11.42□□□□□ -0.58
AC087477.3-201ENST00000559214 MS4A3Q96HJ5 214 aa11.41□□□□□ -0.58
AC087477.3-201ENST00000559214 CCDC61Q9Y6R9 512 aa11.4□□□□□ -0.58
AC087477.3-201ENST00000559214 ASTLQ6HA08 431 aaPredicted RBP11.38□□□□□ -0.59
AC087477.3-201ENST00000559214 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms