RNA–Protein interactions for RNA: ENST00000595809.1

LINC01966-201, Transcript of long intergenic non-protein coding RNA 1966, humanhuman

TSL 5 BASIC

Gene LINC01966, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01966-201ENST00000595809 AEBP2Q6ZN18 517 aaPredicted RBP25.85■■□□□ 1.73
LINC01966-201ENST00000595809 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
LINC01966-201ENST00000595809 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
LINC01966-201ENST00000595809 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
LINC01966-201ENST00000595809 FOXD1Q16676 465 aa20.51■□□□□ 0.87
LINC01966-201ENST00000595809 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
LINC01966-201ENST00000595809 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
LINC01966-201ENST00000595809 ADRA2BP18089 450 aa19.24■□□□□ 0.67
LINC01966-201ENST00000595809 PIAS4Q8N2W9 510 aaPredicted RBP19.19■□□□□ 0.66
LINC01966-201ENST00000595809 MSH5O43196 834 aa19.12■□□□□ 0.65
LINC01966-201ENST00000595809 POTEDQ86YR6 584 aa18.46■□□□□ 0.55
LINC01966-201ENST00000595809 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
LINC01966-201ENST00000595809 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
LINC01966-201ENST00000595809 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
LINC01966-201ENST00000595809 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
LINC01966-201ENST00000595809 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
LINC01966-201ENST00000595809 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
LINC01966-201ENST00000595809 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
LINC01966-201ENST00000595809 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
LINC01966-201ENST00000595809 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
LINC01966-201ENST00000595809 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
LINC01966-201ENST00000595809 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
LINC01966-201ENST00000595809 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
LINC01966-201ENST00000595809 KCNA4P22459 653 aa16.29■□□□□ 0.2
LINC01966-201ENST00000595809 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
LINC01966-201ENST00000595809 C1QBPQ07021 282 aaKnown RBP16.1■□□□□ 0.17
LINC01966-201ENST00000595809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC01966-201ENST00000595809 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
LINC01966-201ENST00000595809 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
LINC01966-201ENST00000595809 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
LINC01966-201ENST00000595809 CAPN15O75808 1086 aa15.46■□□□□ 0.07
LINC01966-201ENST00000595809 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
LINC01966-201ENST00000595809 DSG3P32926 999 aa15.36■□□□□ 0.05
LINC01966-201ENST00000595809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
LINC01966-201ENST00000595809 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
LINC01966-201ENST00000595809 APLP2Q06481 763 aa15.3■□□□□ 0.04
LINC01966-201ENST00000595809 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.04
LINC01966-201ENST00000595809 TRHP20396 242 aaPredicted RBP15.26■□□□□ 0.03
LINC01966-201ENST00000595809 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
LINC01966-201ENST00000595809 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
LINC01966-201ENST00000595809 ABCB7O75027 752 aa15.13■□□□□ 0.01
LINC01966-201ENST00000595809 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
LINC01966-201ENST00000595809 ZBTB22O15209 634 aa14.98□□□□□ -0.01
LINC01966-201ENST00000595809 ATF5Q9Y2D1 282 aaPredicted RBP14.89□□□□□ -0.03
LINC01966-201ENST00000595809 POLA2Q14181 598 aa14.88□□□□□ -0.03
LINC01966-201ENST00000595809 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
LINC01966-201ENST00000595809 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
LINC01966-201ENST00000595809 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
LINC01966-201ENST00000595809 POTEHQ6S545 545 aa14.49□□□□□ -0.09
LINC01966-201ENST00000595809 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
LINC01966-201ENST00000595809 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
LINC01966-201ENST00000595809 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
LINC01966-201ENST00000595809 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
LINC01966-201ENST00000595809 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.13
LINC01966-201ENST00000595809 FBLN2P98095 1184 aa14.26□□□□□ -0.13
LINC01966-201ENST00000595809 MKRN4PQ13434 485 aaPredicted RBP14.21□□□□□ -0.13
LINC01966-201ENST00000595809 REM2Q8IYK8 340 aaPredicted RBP14.2□□□□□ -0.14
LINC01966-201ENST00000595809 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
LINC01966-201ENST00000595809 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
LINC01966-201ENST00000595809 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
LINC01966-201ENST00000595809 PITPNM1O00562 1244 aa14.05□□□□□ -0.16
LINC01966-201ENST00000595809 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
LINC01966-201ENST00000595809 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
LINC01966-201ENST00000595809 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
LINC01966-201ENST00000595809 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC01966-201ENST00000595809 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
LINC01966-201ENST00000595809 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
LINC01966-201ENST00000595809 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC01966-201ENST00000595809 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
LINC01966-201ENST00000595809 HAX1O00165 279 aa13.67□□□□□ -0.22
LINC01966-201ENST00000595809 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
LINC01966-201ENST00000595809 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
LINC01966-201ENST00000595809 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
LINC01966-201ENST00000595809 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
LINC01966-201ENST00000595809 EVX2Q03828 476 aa13.54□□□□□ -0.24
LINC01966-201ENST00000595809 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
LINC01966-201ENST00000595809 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
LINC01966-201ENST00000595809 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
LINC01966-201ENST00000595809 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
LINC01966-201ENST00000595809 PROM2Q8N271 834 aa13.28□□□□□ -0.28
LINC01966-201ENST00000595809 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
LINC01966-201ENST00000595809 GABBR2O75899 941 aa13.22□□□□□ -0.29
LINC01966-201ENST00000595809 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
LINC01966-201ENST00000595809 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
LINC01966-201ENST00000595809 NISCHQ9Y2I1 1504 aa13.06□□□□□ -0.32
LINC01966-201ENST00000595809 NPM1P06748 294 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC01966-201ENST00000595809 FKBP8Q14318 412 aa13.05□□□□□ -0.32
LINC01966-201ENST00000595809 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
LINC01966-201ENST00000595809 CLCN6P51797 869 aa13.02□□□□□ -0.33
LINC01966-201ENST00000595809 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
LINC01966-201ENST00000595809 MIER1Q8N108 512 aa12.96□□□□□ -0.33
LINC01966-201ENST00000595809 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
LINC01966-201ENST00000595809 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
LINC01966-201ENST00000595809 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
LINC01966-201ENST00000595809 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
LINC01966-201ENST00000595809 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
LINC01966-201ENST00000595809 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
LINC01966-201ENST00000595809 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
LINC01966-201ENST00000595809 LHX8Q68G74 356 aa12.8□□□□□ -0.36
LINC01966-201ENST00000595809 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms