Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 HSPD1P1-201ENST00000503199 1726 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC131649.2-201ENST00000624925 4439 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 GUCY2GP-201ENST00000479705 3222 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 RN7SKP50-201ENST00000364694 315 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.279-201ENST00000364763 95 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 RNU6-1227P-201ENST00000383981 107 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 SNORA10-201ENST00000384084 133 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.460-201ENST00000384255 102 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.529-201ENST00000384586 119 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 MIR106B-201ENST00000385301 82 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AL590143.1-201ENST00000405071 138 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 PKMP3-201ENST00000405497 715 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.598-201ENST00000410480 95 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 C1DP2-201ENST00000418167 426 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AL356583.2-201ENST00000426536 280 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AL451074.3-201ENST00000437709 472 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 CYP2C56P-201ENST00000440076 291 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 ARMC8P1-201ENST00000443069 1289 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AL353803.3-201ENST00000444641 335 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 RN7SL228P-201ENST00000470060 303 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 RPS3AP49-201ENST00000472161 790 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 SAP18P1-201ENST00000512058 390 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 RNY4P37-201ENST00000516225 96 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 SNORA18.6-201ENST00000516792 115 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 SDHCP4-201ENST00000532834 510 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 RN7SL473P-201ENST00000580341 299 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 RN7SL697P-201ENST00000582484 299 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC090241.1-201ENST00000587732 621 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC140658.6-201ENST00000603958 201 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 FXYD6P1-201ENST00000604857 285 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC023206.1-201ENST00000605824 298 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.812-201ENST00000610788 101 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.784-201ENST00000613803 101 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC008250.2-201ENST00000615261 205 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.787-201ENST00000616522 101 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.780-201ENST00000617336 101 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.801-201ENST00000619005 101 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC092650.2-201ENST00000619984 902 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC005383.1-201ENST00000622689 534 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AL353898.2-201ENST00000623000 255 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AC016582.3-206ENST00000636547 207 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms