RNA–Protein interactions for RNA: ENST00000392867.7

GTDC1-203, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-203ENST00000392867 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.19
GTDC1-203ENST00000392867 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
GTDC1-203ENST00000392867 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
GTDC1-203ENST00000392867 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
GTDC1-203ENST00000392867 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
GTDC1-203ENST00000392867 KCNA4P22459 653 aa13.11□□□□□ -0.31
GTDC1-203ENST00000392867 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
GTDC1-203ENST00000392867 ADRA2BP18089 450 aa12.92□□□□□ -0.34
GTDC1-203ENST00000392867 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
GTDC1-203ENST00000392867 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
GTDC1-203ENST00000392867 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
GTDC1-203ENST00000392867 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
GTDC1-203ENST00000392867 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
GTDC1-203ENST00000392867 PPP4R3CPQ6ZMV5 832 aa12.18□□□□□ -0.46
GTDC1-203ENST00000392867 FOXD1Q16676 465 aa12.15□□□□□ -0.46
GTDC1-203ENST00000392867 ZBTB22O15209 634 aa12.12□□□□□ -0.47
GTDC1-203ENST00000392867 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
GTDC1-203ENST00000392867 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
GTDC1-203ENST00000392867 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
GTDC1-203ENST00000392867 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
GTDC1-203ENST00000392867 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
GTDC1-203ENST00000392867 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
GTDC1-203ENST00000392867 FKBP8Q14318 412 aa11.52□□□□□ -0.56
GTDC1-203ENST00000392867 PRKCSHP14314 528 aaPredicted RBP11.28□□□□□ -0.6
GTDC1-203ENST00000392867 SCAF1Q9H7N4 1312 aaKnown RBP11.28□□□□□ -0.6
GTDC1-203ENST00000392867 DNAJC5BQ9UF47 199 aa11.28□□□□□ -0.6
GTDC1-203ENST00000392867 PLCB2Q00722 1185 aa11.19□□□□□ -0.62
GTDC1-203ENST00000392867 MAPK8IP2Q13387 824 aaPredicted RBP11.16□□□□□ -0.62
GTDC1-203ENST00000392867 SLC4A2P04920 1241 aa11.12□□□□□ -0.63
GTDC1-203ENST00000392867 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
GTDC1-203ENST00000392867 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
GTDC1-203ENST00000392867 BCANQ96GW7 911 aa11.07□□□□□ -0.64
GTDC1-203ENST00000392867 TAOK2Q9UL54 1235 aa11.07□□□□□ -0.64
GTDC1-203ENST00000392867 ATXN8OSP0DMR3 200 aa11.06□□□□□ -0.64
GTDC1-203ENST00000392867 MYCNP04198 464 aaPredicted RBP10.97□□□□□ -0.65
GTDC1-203ENST00000392867 TPRNQ4KMQ1 711 aa10.92□□□□□ -0.66
GTDC1-203ENST00000392867 DCAF8L2P0C7V8 631 aa10.88□□□□□ -0.67
GTDC1-203ENST00000392867 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
GTDC1-203ENST00000392867 ATF5Q9Y2D1 282 aaPredicted RBP10.79□□□□□ -0.68
GTDC1-203ENST00000392867 HOXD11P31277 338 aaPredicted RBP10.78□□□□□ -0.68
GTDC1-203ENST00000392867 KDM2AQ9Y2K7 1162 aa10.75□□□□□ -0.69
GTDC1-203ENST00000392867 TIMELESSQ9UNS1 1208 aa10.71□□□□□ -0.69
GTDC1-203ENST00000392867 FBLN2P98095 1184 aa10.7□□□□□ -0.7
GTDC1-203ENST00000392867 FBXO3Q9UK99 471 aa10.68□□□□□ -0.7
GTDC1-203ENST00000392867 MSH5O43196 834 aa10.66□□□□□ -0.7
GTDC1-203ENST00000392867 TULP1O00294 542 aaPredicted RBP10.64□□□□□ -0.71
GTDC1-203ENST00000392867 PKD2Q13563 968 aa10.62□□□□□ -0.71
GTDC1-203ENST00000392867 DAXXQ9UER7 740 aaPredicted RBP10.62□□□□□ -0.71
GTDC1-203ENST00000392867 DMRT2Q9Y5R5 561 aa10.62□□□□□ -0.71
GTDC1-203ENST00000392867 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
GTDC1-203ENST00000392867 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
GTDC1-203ENST00000392867 PAXIP1Q6ZW49 1069 aaPredicted RBP10.55□□□□□ -0.72
GTDC1-203ENST00000392867 CFAP44Q96MT7 982 aa10.54□□□□□ -0.72
GTDC1-203ENST00000392867 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.53□□□□□ -0.72
GTDC1-203ENST00000392867 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
GTDC1-203ENST00000392867 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
GTDC1-203ENST00000392867 BBXQ8WY36 941 aaPredicted RBP10.49□□□□□ -0.73
GTDC1-203ENST00000392867 ARXQ96QS3 562 aa10.49□□□□□ -0.73
GTDC1-203ENST00000392867 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
GTDC1-203ENST00000392867 TSHZ2Q9NRE2 1034 aa10.44□□□□□ -0.74
GTDC1-203ENST00000392867 PROM2Q8N271 834 aa10.41□□□□□ -0.74
GTDC1-203ENST00000392867 SAMD1Q6SPF0 538 aaPredicted RBP10.39□□□□□ -0.75
GTDC1-203ENST00000392867 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
GTDC1-203ENST00000392867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.35□□□□□ -0.75
GTDC1-203ENST00000392867 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
GTDC1-203ENST00000392867 ECM2O94769 699 aaPredicted RBP10.34□□□□□ -0.75
GTDC1-203ENST00000392867 POTEDQ86YR6 584 aa10.34□□□□□ -0.75
GTDC1-203ENST00000392867 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
GTDC1-203ENST00000392867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.75
GTDC1-203ENST00000392867 NBR1Q14596 966 aa10.33□□□□□ -0.76
GTDC1-203ENST00000392867 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
GTDC1-203ENST00000392867 U3KPZ7 1027 aaPredicted RBP10.31□□□□□ -0.76
GTDC1-203ENST00000392867 RGL2O15211 777 aa10.27□□□□□ -0.77
GTDC1-203ENST00000392867 HOMEZQ8IX15 550 aa10.26□□□□□ -0.77
GTDC1-203ENST00000392867 DCAF8L1A6NGE4 600 aa10.25□□□□□ -0.77
GTDC1-203ENST00000392867 TMEM132AQ24JP5 1023 aa10.25□□□□□ -0.77
GTDC1-203ENST00000392867 KLHL34Q8N239 644 aa10.23□□□□□ -0.77
GTDC1-203ENST00000392867 ERICH6Q7L0X2 663 aa10.21□□□□□ -0.78
GTDC1-203ENST00000392867 SPOCK2Q92563 424 aa10.21□□□□□ -0.78
GTDC1-203ENST00000392867 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
GTDC1-203ENST00000392867 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
GTDC1-203ENST00000392867 CHGAP10645 457 aaKnown RBP10.16□□□□□ -0.78
GTDC1-203ENST00000392867 SUPT5HO00267 1087 aaKnown RBP9.98□□□□□ -0.81
GTDC1-203ENST00000392867 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
GTDC1-203ENST00000392867 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
GTDC1-203ENST00000392867 PODXL2Q9NZ53 605 aa9.94□□□□□ -0.82
GTDC1-203ENST00000392867 APLP2Q06481 763 aa9.93□□□□□ -0.82
GTDC1-203ENST00000392867 POLA2Q14181 598 aa9.93□□□□□ -0.82
GTDC1-203ENST00000392867 HS6ST3Q8IZP7 471 aa9.92□□□□□ -0.82
GTDC1-203ENST00000392867 NKX1-1Q15270 411 aaPredicted RBP9.89□□□□□ -0.83
GTDC1-203ENST00000392867 TRHP20396 242 aaPredicted RBP9.88□□□□□ -0.83
GTDC1-203ENST00000392867 MIER1Q8N108 512 aa9.88□□□□□ -0.83
GTDC1-203ENST00000392867 STAG3Q9UJ98 1225 aa9.84□□□□□ -0.83
GTDC1-203ENST00000392867 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
GTDC1-203ENST00000392867 RANGAP1P46060 587 aaPredicted RBP9.84□□□□□ -0.83
GTDC1-203ENST00000392867 RNF25Q96BH1 459 aaPredicted RBP9.84□□□□□ -0.83
GTDC1-203ENST00000392867 BRPF1P55201 1214 aaPredicted RBP9.82□□□□□ -0.84
GTDC1-203ENST00000392867 SPINK5Q9NQ38 1064 aaPredicted RBP9.8□□□□□ -0.84
GTDC1-203ENST00000392867 UBTFP17480 764 aaKnown RBP9.77□□□□□ -0.85
GTDC1-203ENST00000392867 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 268.8 ms