RNA–Protein interactions for RNA: ENST00000427806.1

AC099060.1-201, humanhuman

TSL 3 BASIC

Gene AC099060.1, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099060.1-201ENST00000427806 AEBP2Q6ZN18 517 aaPredicted RBP23.66■■□□□ 1.38
AC099060.1-201ENST00000427806 CHIC1Q5VXU3 224 aa22.18■■□□□ 1.14
AC099060.1-201ENST00000427806 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
AC099060.1-201ENST00000427806 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
AC099060.1-201ENST00000427806 FOXD1Q16676 465 aa19.01■□□□□ 0.63
AC099060.1-201ENST00000427806 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
AC099060.1-201ENST00000427806 MSH5O43196 834 aa18.11■□□□□ 0.49
AC099060.1-201ENST00000427806 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
AC099060.1-201ENST00000427806 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
AC099060.1-201ENST00000427806 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
AC099060.1-201ENST00000427806 ADRA2BP18089 450 aa17.15■□□□□ 0.34
AC099060.1-201ENST00000427806 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.16
AC099060.1-201ENST00000427806 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
AC099060.1-201ENST00000427806 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
AC099060.1-201ENST00000427806 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
AC099060.1-201ENST00000427806 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
AC099060.1-201ENST00000427806 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
AC099060.1-201ENST00000427806 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
AC099060.1-201ENST00000427806 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
AC099060.1-201ENST00000427806 PPP4R3CPQ6ZMV5 832 aa14.97□□□□□ -0.01
AC099060.1-201ENST00000427806 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
AC099060.1-201ENST00000427806 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
AC099060.1-201ENST00000427806 DNAJC5BQ9UF47 199 aa14.79□□□□□ -0.04
AC099060.1-201ENST00000427806 POTEHQ6S545 545 aa14.59□□□□□ -0.07
AC099060.1-201ENST00000427806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.09
AC099060.1-201ENST00000427806 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
AC099060.1-201ENST00000427806 DSG3P32926 999 aa14.15□□□□□ -0.14
AC099060.1-201ENST00000427806 CAPN15O75808 1086 aa14.1□□□□□ -0.15
AC099060.1-201ENST00000427806 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
AC099060.1-201ENST00000427806 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
AC099060.1-201ENST00000427806 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
AC099060.1-201ENST00000427806 KCNA4P22459 653 aa13.81□□□□□ -0.2
AC099060.1-201ENST00000427806 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
AC099060.1-201ENST00000427806 ABCB7O75027 752 aa13.7□□□□□ -0.22
AC099060.1-201ENST00000427806 APLP2Q06481 763 aa13.69□□□□□ -0.22
AC099060.1-201ENST00000427806 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
AC099060.1-201ENST00000427806 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
AC099060.1-201ENST00000427806 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
AC099060.1-201ENST00000427806 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
AC099060.1-201ENST00000427806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.49□□□□□ -0.25
AC099060.1-201ENST00000427806 HNRNPUL2Q1KMD3 747 aaKnown RBP13.49□□□□□ -0.25
AC099060.1-201ENST00000427806 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
AC099060.1-201ENST00000427806 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
AC099060.1-201ENST00000427806 POLA2Q14181 598 aa13.17□□□□□ -0.3
AC099060.1-201ENST00000427806 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
AC099060.1-201ENST00000427806 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
AC099060.1-201ENST00000427806 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
AC099060.1-201ENST00000427806 HAX1O00165 279 aa12.99□□□□□ -0.33
AC099060.1-201ENST00000427806 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
AC099060.1-201ENST00000427806 REM2Q8IYK8 340 aaPredicted RBP12.95□□□□□ -0.34
AC099060.1-201ENST00000427806 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
AC099060.1-201ENST00000427806 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
AC099060.1-201ENST00000427806 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
AC099060.1-201ENST00000427806 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
AC099060.1-201ENST00000427806 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
AC099060.1-201ENST00000427806 ZBTB22O15209 634 aa12.72□□□□□ -0.37
AC099060.1-201ENST00000427806 EVX2Q03828 476 aa12.71□□□□□ -0.37
AC099060.1-201ENST00000427806 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
AC099060.1-201ENST00000427806 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
AC099060.1-201ENST00000427806 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
AC099060.1-201ENST00000427806 LHX8Q68G74 356 aa12.52□□□□□ -0.41
AC099060.1-201ENST00000427806 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
AC099060.1-201ENST00000427806 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
AC099060.1-201ENST00000427806 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
AC099060.1-201ENST00000427806 GABBR2O75899 941 aa12.43□□□□□ -0.42
AC099060.1-201ENST00000427806 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
AC099060.1-201ENST00000427806 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
AC099060.1-201ENST00000427806 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
AC099060.1-201ENST00000427806 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
AC099060.1-201ENST00000427806 FBLN2P98095 1184 aa12.3□□□□□ -0.44
AC099060.1-201ENST00000427806 PLSCR2Q9NRY7 297 aa12.29□□□□□ -0.44
AC099060.1-201ENST00000427806 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
AC099060.1-201ENST00000427806 SSUH2Q9Y2M2 353 aa12.17□□□□□ -0.46
AC099060.1-201ENST00000427806 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
AC099060.1-201ENST00000427806 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
AC099060.1-201ENST00000427806 POTEIP0CG38 1075 aa12.13□□□□□ -0.47
AC099060.1-201ENST00000427806 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
AC099060.1-201ENST00000427806 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
AC099060.1-201ENST00000427806 CLCN6P51797 869 aa12.06□□□□□ -0.48
AC099060.1-201ENST00000427806 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
AC099060.1-201ENST00000427806 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
AC099060.1-201ENST00000427806 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
AC099060.1-201ENST00000427806 FARP1Q9Y4F1 1045 aaPredicted RBP11.95□□□□□ -0.5
AC099060.1-201ENST00000427806 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
AC099060.1-201ENST00000427806 POTEMA6NI47 508 aa11.83□□□□□ -0.52
AC099060.1-201ENST00000427806 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
AC099060.1-201ENST00000427806 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
AC099060.1-201ENST00000427806 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
AC099060.1-201ENST00000427806 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
AC099060.1-201ENST00000427806 POTEB2H3BUK9 544 aa11.72□□□□□ -0.53
AC099060.1-201ENST00000427806 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
AC099060.1-201ENST00000427806 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
AC099060.1-201ENST00000427806 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
AC099060.1-201ENST00000427806 PHF12Q96QT6 1004 aa11.55□□□□□ -0.56
AC099060.1-201ENST00000427806 PELP1Q8IZL8 1130 aaKnown RBP11.53□□□□□ -0.56
AC099060.1-201ENST00000427806 STAG3Q9UJ98 1225 aa11.52□□□□□ -0.57
AC099060.1-201ENST00000427806 METRNQ9UJH8 293 aa11.51□□□□□ -0.57
AC099060.1-201ENST00000427806 MAMSTRQ6ZN01 415 aa11.49□□□□□ -0.57
AC099060.1-201ENST00000427806 SLC39A7Q92504 469 aa11.47□□□□□ -0.57
AC099060.1-201ENST00000427806 FKBP8Q14318 412 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms