RNA–Protein interactions for RNA: ENST00000510832.5

LINC01060-204, Transcript of long intergenic non-protein coding RNA 1060, humanhuman

TSL 2 BASIC

Gene LINC01060, Length 2,435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01060-204ENST00000510832 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
LINC01060-204ENST00000510832 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
LINC01060-204ENST00000510832 AEBP2Q6ZN18 517 aaPredicted RBP16■□□□□ 0.15
LINC01060-204ENST00000510832 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
LINC01060-204ENST00000510832 ABCC9O60706 1549 aa14.39□□□□□ -0.11
LINC01060-204ENST00000510832 DCAF8L2P0C7V8 631 aa14.17□□□□□ -0.14
LINC01060-204ENST00000510832 CCDC180Q9P1Z9 1646 aa14.07□□□□□ -0.16
LINC01060-204ENST00000510832 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
LINC01060-204ENST00000510832 PABPN1Q86U42 306 aaKnown RBP eCLIP13.65□□□□□ -0.22
LINC01060-204ENST00000510832 MYT1Q01538 1121 aa13.56□□□□□ -0.24
LINC01060-204ENST00000510832 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
LINC01060-204ENST00000510832 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
LINC01060-204ENST00000510832 ZCCHC6Q5VYS8 1495 aaKnown RBP13.42□□□□□ -0.26
LINC01060-204ENST00000510832 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
LINC01060-204ENST00000510832 HRCP23327 699 aa13.4□□□□□ -0.26
LINC01060-204ENST00000510832 SHROOM4Q9ULL8 1493 aa13.38□□□□□ -0.27
LINC01060-204ENST00000510832 NACADO15069 1562 aa13.33□□□□□ -0.27
LINC01060-204ENST00000510832 SCRIBQ14160 1630 aa13.3□□□□□ -0.28
LINC01060-204ENST00000510832 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
LINC01060-204ENST00000510832 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
LINC01060-204ENST00000510832 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
LINC01060-204ENST00000510832 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
LINC01060-204ENST00000510832 MYO15BQ96JP2 1530 aa13.06□□□□□ -0.32
LINC01060-204ENST00000510832 TTBK1Q5TCY1 1321 aaPredicted RBP13.02□□□□□ -0.32
LINC01060-204ENST00000510832 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
LINC01060-204ENST00000510832 PPARGC1BQ86YN6 1023 aaKnown RBP12.97□□□□□ -0.33
LINC01060-204ENST00000510832 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
LINC01060-204ENST00000510832 CECR2Q9BXF3 1484 aa12.86□□□□□ -0.35
LINC01060-204ENST00000510832 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
LINC01060-204ENST00000510832 EIF4G1Q04637 1599 aaKnown RBP12.8□□□□□ -0.36
LINC01060-204ENST00000510832 ADRA2BP18089 450 aa12.78□□□□□ -0.36
LINC01060-204ENST00000510832 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
LINC01060-204ENST00000510832 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
LINC01060-204ENST00000510832 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
LINC01060-204ENST00000510832 SCAF1Q9H7N4 1312 aaKnown RBP12.65□□□□□ -0.38
LINC01060-204ENST00000510832 KCNA4P22459 653 aa12.63□□□□□ -0.39
LINC01060-204ENST00000510832 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
LINC01060-204ENST00000510832 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
LINC01060-204ENST00000510832 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
LINC01060-204ENST00000510832 SMARCA4P51532 1647 aa12.52□□□□□ -0.41
LINC01060-204ENST00000510832 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
LINC01060-204ENST00000510832 WIZO95785 1651 aa12.48□□□□□ -0.41
LINC01060-204ENST00000510832 NESP48681 1621 aa12.47□□□□□ -0.41
LINC01060-204ENST00000510832 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
LINC01060-204ENST00000510832 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
LINC01060-204ENST00000510832 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
LINC01060-204ENST00000510832 NCAPD3P42695 1498 aa12.41□□□□□ -0.42
LINC01060-204ENST00000510832 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
LINC01060-204ENST00000510832 FOXD1Q16676 465 aa12.37□□□□□ -0.43
LINC01060-204ENST00000510832 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
LINC01060-204ENST00000510832 ERCC6Q03468 1493 aa12.29□□□□□ -0.44
LINC01060-204ENST00000510832 PRKCSHP14314 528 aaPredicted RBP12.29□□□□□ -0.44
LINC01060-204ENST00000510832 NEUROD1Q13562 356 aa12.27□□□□□ -0.44
LINC01060-204ENST00000510832 ERICH6Q7L0X2 663 aa12.27□□□□□ -0.45
LINC01060-204ENST00000510832 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
LINC01060-204ENST00000510832 CENPBP07199 599 aaPredicted RBP12.23□□□□□ -0.45
LINC01060-204ENST00000510832 BCL11AQ9H165 835 aa12.22□□□□□ -0.45
LINC01060-204ENST00000510832 GTF3C3Q9Y5Q9 886 aa12.22□□□□□ -0.45
LINC01060-204ENST00000510832 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.45
LINC01060-204ENST00000510832 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
LINC01060-204ENST00000510832 CADPSQ9ULU8 1353 aa12.17□□□□□ -0.46
LINC01060-204ENST00000510832 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
LINC01060-204ENST00000510832 APLP2Q06481 763 aa12.15□□□□□ -0.46
LINC01060-204ENST00000510832 TOP2AP11388 1531 aaKnown RBP12.14□□□□□ -0.47
LINC01060-204ENST00000510832 DIEXFQ68CQ4 756 aaKnown RBP12.1□□□□□ -0.47
LINC01060-204ENST00000510832 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
LINC01060-204ENST00000510832 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
LINC01060-204ENST00000510832 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
LINC01060-204ENST00000510832 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
LINC01060-204ENST00000510832 PDS5BQ9NTI5 1447 aa12.05□□□□□ -0.48
LINC01060-204ENST00000510832 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
LINC01060-204ENST00000510832 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
LINC01060-204ENST00000510832 CFTRP13569 1480 aa12.03□□□□□ -0.48
LINC01060-204ENST00000510832 LAMC3Q9Y6N6 1575 aa12.02□□□□□ -0.49
LINC01060-204ENST00000510832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
LINC01060-204ENST00000510832 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
LINC01060-204ENST00000510832 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
LINC01060-204ENST00000510832 URB2Q14146 1524 aaKnown RBP11.97□□□□□ -0.49
LINC01060-204ENST00000510832 THOC2Q8NI27 1593 aaKnown RBP11.95□□□□□ -0.5
LINC01060-204ENST00000510832 MRC2Q9UBG0 1479 aa11.93□□□□□ -0.5
LINC01060-204ENST00000510832 FBLN2P98095 1184 aa11.92□□□□□ -0.5
LINC01060-204ENST00000510832 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
LINC01060-204ENST00000510832 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
LINC01060-204ENST00000510832 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
LINC01060-204ENST00000510832 ABCC8Q09428 1581 aa11.88□□□□□ -0.51
LINC01060-204ENST00000510832 TDRD9Q8NDG6 1382 aaKnown RBP11.88□□□□□ -0.51
LINC01060-204ENST00000510832 CUX2O14529 1486 aa11.86□□□□□ -0.51
LINC01060-204ENST00000510832 AQRO60306 1485 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC01060-204ENST00000510832 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
LINC01060-204ENST00000510832 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
LINC01060-204ENST00000510832 PIAS4Q8N2W9 510 aaPredicted RBP11.82□□□□□ -0.52
LINC01060-204ENST00000510832 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
LINC01060-204ENST00000510832 WDR62O43379 1518 aa11.82□□□□□ -0.52
LINC01060-204ENST00000510832 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
LINC01060-204ENST00000510832 YTHDC1Q96MU7 727 aaKnown RBP11.8□□□□□ -0.52
LINC01060-204ENST00000510832 CLSPNQ9HAW4 1339 aa11.8□□□□□ -0.52
LINC01060-204ENST00000510832 CUX1P39880 1505 aa11.79□□□□□ -0.52
LINC01060-204ENST00000510832 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.53
LINC01060-204ENST00000510832 SOGA1O94964 1423 aa11.77□□□□□ -0.53
LINC01060-204ENST00000510832 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 448.1 ms