RNA–Protein interactions for RNA: ENST00000603717.1

AC008555.3-201, humanhuman

TSL 3 BASIC

Gene AC008555.3, Length 442 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.3-201ENST00000603717 AEBP2Q6ZN18 517 aaPredicted RBP30.17■■■□□ 2.42
AC008555.3-201ENST00000603717 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
AC008555.3-201ENST00000603717 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
AC008555.3-201ENST00000603717 PHF23Q9BUL5 403 aaPredicted RBP25.3■■□□□ 1.64
AC008555.3-201ENST00000603717 POTEDQ86YR6 584 aa24.66■■□□□ 1.54
AC008555.3-201ENST00000603717 FOXD1Q16676 465 aa24.25■■□□□ 1.47
AC008555.3-201ENST00000603717 MSH5O43196 834 aa23.05■■□□□ 1.28
AC008555.3-201ENST00000603717 PIAS4Q8N2W9 510 aaPredicted RBP22.28■■□□□ 1.16
AC008555.3-201ENST00000603717 PPP6R1Q9UPN7 881 aa21.79■■□□□ 1.08
AC008555.3-201ENST00000603717 ADRA2BP18089 450 aa21.58■■□□□ 1.05
AC008555.3-201ENST00000603717 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
AC008555.3-201ENST00000603717 CACNB1Q02641 598 aaPredicted RBP20.51■□□□□ 0.87
AC008555.3-201ENST00000603717 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
AC008555.3-201ENST00000603717 MAPK8IP2Q13387 824 aaPredicted RBP20.23■□□□□ 0.83
AC008555.3-201ENST00000603717 RNF39Q9H2S5 420 aa19.64■□□□□ 0.73
AC008555.3-201ENST00000603717 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
AC008555.3-201ENST00000603717 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
AC008555.3-201ENST00000603717 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
AC008555.3-201ENST00000603717 HOXD11P31277 338 aaPredicted RBP19.09■□□□□ 0.65
AC008555.3-201ENST00000603717 POTEHQ6S545 545 aa19.04■□□□□ 0.64
AC008555.3-201ENST00000603717 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
AC008555.3-201ENST00000603717 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
AC008555.3-201ENST00000603717 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
AC008555.3-201ENST00000603717 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
AC008555.3-201ENST00000603717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.48
AC008555.3-201ENST00000603717 DSG3P32926 999 aa17.98■□□□□ 0.47
AC008555.3-201ENST00000603717 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
AC008555.3-201ENST00000603717 CAPN15O75808 1086 aa17.69■□□□□ 0.42
AC008555.3-201ENST00000603717 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
AC008555.3-201ENST00000603717 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
AC008555.3-201ENST00000603717 SP7Q8TDD2 431 aaPredicted RBP17.28■□□□□ 0.36
AC008555.3-201ENST00000603717 CHRDL2Q6WN34 429 aa17.25■□□□□ 0.35
AC008555.3-201ENST00000603717 ABCB7O75027 752 aa17.24■□□□□ 0.35
AC008555.3-201ENST00000603717 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
AC008555.3-201ENST00000603717 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
AC008555.3-201ENST00000603717 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
AC008555.3-201ENST00000603717 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
AC008555.3-201ENST00000603717 APLP2Q06481 763 aa16.84■□□□□ 0.29
AC008555.3-201ENST00000603717 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
AC008555.3-201ENST00000603717 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
AC008555.3-201ENST00000603717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
AC008555.3-201ENST00000603717 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
AC008555.3-201ENST00000603717 HAX1O00165 279 aa16.55■□□□□ 0.24
AC008555.3-201ENST00000603717 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
AC008555.3-201ENST00000603717 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
AC008555.3-201ENST00000603717 EVX2Q03828 476 aa16.42■□□□□ 0.22
AC008555.3-201ENST00000603717 POLA2Q14181 598 aa16.42■□□□□ 0.22
AC008555.3-201ENST00000603717 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
AC008555.3-201ENST00000603717 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.2
AC008555.3-201ENST00000603717 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
AC008555.3-201ENST00000603717 LHX8Q68G74 356 aa16.17■□□□□ 0.18
AC008555.3-201ENST00000603717 PLSCR2Q9NRY7 297 aa16.11■□□□□ 0.17
AC008555.3-201ENST00000603717 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
AC008555.3-201ENST00000603717 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
AC008555.3-201ENST00000603717 GABBR2O75899 941 aa15.89■□□□□ 0.13
AC008555.3-201ENST00000603717 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
AC008555.3-201ENST00000603717 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
AC008555.3-201ENST00000603717 KCNA4P22459 653 aa15.82■□□□□ 0.12
AC008555.3-201ENST00000603717 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
AC008555.3-201ENST00000603717 PRKAR2AP13861 404 aaKnown RBP15.73■□□□□ 0.11
AC008555.3-201ENST00000603717 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
AC008555.3-201ENST00000603717 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
AC008555.3-201ENST00000603717 SPDYE2BA6NHP3 402 aa15.38■□□□□ 0.05
AC008555.3-201ENST00000603717 SPDYE6P0CI01 402 aa15.38■□□□□ 0.05
AC008555.3-201ENST00000603717 SPDYE2Q495Y8 402 aa15.38■□□□□ 0.05
AC008555.3-201ENST00000603717 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
AC008555.3-201ENST00000603717 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
AC008555.3-201ENST00000603717 POTEMA6NI47 508 aa15.29■□□□□ 0.04
AC008555.3-201ENST00000603717 OTUD5Q96G74 571 aa15.24■□□□□ 0.03
AC008555.3-201ENST00000603717 POTEGQ6S5H5 508 aa15.21■□□□□ 0.03
AC008555.3-201ENST00000603717 CD44P16070 742 aaKnown RBP15.16■□□□□ 0.02
AC008555.3-201ENST00000603717 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
AC008555.3-201ENST00000603717 CLCN6P51797 869 aa15.11■□□□□ 0.01
AC008555.3-201ENST00000603717 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
AC008555.3-201ENST00000603717 DCBLD2Q96PD2 775 aa15.1■□□□□ 0.01
AC008555.3-201ENST00000603717 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
AC008555.3-201ENST00000603717 PCDH10Q9P2E7 1040 aa15.04■□□□□ -0
AC008555.3-201ENST00000603717 FBLN2P98095 1184 aa15□□□□□ -0.01
AC008555.3-201ENST00000603717 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
AC008555.3-201ENST00000603717 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
AC008555.3-201ENST00000603717 FARP1Q9Y4F1 1045 aaPredicted RBP14.95□□□□□ -0.02
AC008555.3-201ENST00000603717 MKRN4PQ13434 485 aaPredicted RBP14.94□□□□□ -0.02
AC008555.3-201ENST00000603717 ZNF579Q8NAF0 562 aaKnown RBP14.91□□□□□ -0.02
AC008555.3-201ENST00000603717 LCE2DQ5TA82 110 aaPredicted RBP14.84□□□□□ -0.03
AC008555.3-201ENST00000603717 GALR2O43603 387 aaPredicted RBP14.83□□□□□ -0.04
AC008555.3-201ENST00000603717 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
AC008555.3-201ENST00000603717 ZRANB1Q9UGI0 708 aa14.74□□□□□ -0.05
AC008555.3-201ENST00000603717 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.05
AC008555.3-201ENST00000603717 POTEJP0CG39 1038 aa14.7□□□□□ -0.06
AC008555.3-201ENST00000603717 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
AC008555.3-201ENST00000603717 ZBTB22O15209 634 aa14.6□□□□□ -0.07
AC008555.3-201ENST00000603717 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
AC008555.3-201ENST00000603717 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
AC008555.3-201ENST00000603717 METRNQ9UJH8 293 aa14.51□□□□□ -0.09
AC008555.3-201ENST00000603717 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
AC008555.3-201ENST00000603717 MAMSTRQ6ZN01 415 aa14.46□□□□□ -0.09
AC008555.3-201ENST00000603717 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
AC008555.3-201ENST00000603717 ASTLQ6HA08 431 aaPredicted RBP14.43□□□□□ -0.1
AC008555.3-201ENST00000603717 C7P10643 843 aa14.4□□□□□ -0.1
AC008555.3-201ENST00000603717 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms