RNA–Protein interactions for RNA: ENST00000532834.2

SDHCP4-201, Transcript of succinate dehydrogenase complex subunit C pseudogene 4, humanhuman

BASIC

Gene SDHCP4, Length 510 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCP4-201ENST00000532834 AEBP2Q6ZN18 517 aaPredicted RBP20.91■□□□□ 0.94
SDHCP4-201ENST00000532834 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
SDHCP4-201ENST00000532834 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
SDHCP4-201ENST00000532834 PHF23Q9BUL5 403 aaPredicted RBP17.58■□□□□ 0.4
SDHCP4-201ENST00000532834 NISCHQ9Y2I1 1504 aa17.27■□□□□ 0.36
SDHCP4-201ENST00000532834 FOXD1Q16676 465 aa16.57■□□□□ 0.24
SDHCP4-201ENST00000532834 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
SDHCP4-201ENST00000532834 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
SDHCP4-201ENST00000532834 ADRA2BP18089 450 aa15.58■□□□□ 0.08
SDHCP4-201ENST00000532834 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
SDHCP4-201ENST00000532834 MSH5O43196 834 aa15.41■□□□□ 0.06
SDHCP4-201ENST00000532834 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
SDHCP4-201ENST00000532834 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
SDHCP4-201ENST00000532834 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
SDHCP4-201ENST00000532834 ABCC9O60706 1549 aa14.56□□□□□ -0.08
SDHCP4-201ENST00000532834 DCAF1Q9Y4B6 1507 aa14.44□□□□□ -0.1
SDHCP4-201ENST00000532834 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
SDHCP4-201ENST00000532834 SCAF1Q9H7N4 1312 aaKnown RBP14.22□□□□□ -0.13
SDHCP4-201ENST00000532834 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
SDHCP4-201ENST00000532834 DMRT2Q9Y5R5 561 aa14.13□□□□□ -0.15
SDHCP4-201ENST00000532834 PPP4R3CPQ6ZMV5 832 aa14.09□□□□□ -0.15
SDHCP4-201ENST00000532834 SHROOM4Q9ULL8 1493 aa14□□□□□ -0.17
SDHCP4-201ENST00000532834 NACADO15069 1562 aa13.92□□□□□ -0.18
SDHCP4-201ENST00000532834 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
SDHCP4-201ENST00000532834 DCAF8L2P0C7V8 631 aa13.79□□□□□ -0.2
SDHCP4-201ENST00000532834 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
SDHCP4-201ENST00000532834 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
SDHCP4-201ENST00000532834 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
SDHCP4-201ENST00000532834 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
SDHCP4-201ENST00000532834 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
SDHCP4-201ENST00000532834 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
SDHCP4-201ENST00000532834 UNC13AQ9UPW8 1703 aa13.58□□□□□ -0.24
SDHCP4-201ENST00000532834 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
SDHCP4-201ENST00000532834 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
SDHCP4-201ENST00000532834 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
SDHCP4-201ENST00000532834 BICRAQ9NZM4 1560 aa13.49□□□□□ -0.25
SDHCP4-201ENST00000532834 RSF1Q96T23 1441 aaPredicted RBP13.44□□□□□ -0.26
SDHCP4-201ENST00000532834 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
SDHCP4-201ENST00000532834 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
SDHCP4-201ENST00000532834 KCNA4P22459 653 aa13.3□□□□□ -0.28
SDHCP4-201ENST00000532834 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
SDHCP4-201ENST00000532834 CECR2Q9BXF3 1484 aa13.26□□□□□ -0.29
SDHCP4-201ENST00000532834 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
SDHCP4-201ENST00000532834 WIZO95785 1651 aa13.19□□□□□ -0.3
SDHCP4-201ENST00000532834 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
SDHCP4-201ENST00000532834 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
SDHCP4-201ENST00000532834 PEG3Q9GZU2 1588 aa13.16□□□□□ -0.3
SDHCP4-201ENST00000532834 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
SDHCP4-201ENST00000532834 EIF4G1Q04637 1599 aaKnown RBP13.14□□□□□ -0.31
SDHCP4-201ENST00000532834 CACNB1Q02641 598 aaPredicted RBP13.12□□□□□ -0.31
SDHCP4-201ENST00000532834 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
SDHCP4-201ENST00000532834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.33
SDHCP4-201ENST00000532834 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
SDHCP4-201ENST00000532834 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
SDHCP4-201ENST00000532834 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
SDHCP4-201ENST00000532834 HMGXB3Q12766 1538 aa12.89□□□□□ -0.35
SDHCP4-201ENST00000532834 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
SDHCP4-201ENST00000532834 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
SDHCP4-201ENST00000532834 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
SDHCP4-201ENST00000532834 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
SDHCP4-201ENST00000532834 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
SDHCP4-201ENST00000532834 EEA1Q15075 1411 aa12.77□□□□□ -0.37
SDHCP4-201ENST00000532834 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
SDHCP4-201ENST00000532834 PRDM2Q13029 1718 aa12.68□□□□□ -0.38
SDHCP4-201ENST00000532834 WRNQ14191 1432 aaPredicted RBP eCLIP12.68□□□□□ -0.38
SDHCP4-201ENST00000532834 BIVM-ERCC5R4GMW8 1640 aa12.63□□□□□ -0.39
SDHCP4-201ENST00000532834 TOP2BQ02880 1626 aa12.62□□□□□ -0.39
SDHCP4-201ENST00000532834 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
SDHCP4-201ENST00000532834 LOC105371045A0A1W2PR82 267 aa12.6□□□□□ -0.39
SDHCP4-201ENST00000532834 KIF21BO75037 1637 aa12.59□□□□□ -0.39
SDHCP4-201ENST00000532834 CFTRP13569 1480 aa12.58□□□□□ -0.4
SDHCP4-201ENST00000532834 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
SDHCP4-201ENST00000532834 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
SDHCP4-201ENST00000532834 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
SDHCP4-201ENST00000532834 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
SDHCP4-201ENST00000532834 NESP48681 1621 aa12.53□□□□□ -0.4
SDHCP4-201ENST00000532834 CUX2O14529 1486 aa12.53□□□□□ -0.4
SDHCP4-201ENST00000532834 CEP164Q9UPV0 1460 aa12.52□□□□□ -0.41
SDHCP4-201ENST00000532834 SOGA1O94964 1423 aa12.49□□□□□ -0.41
SDHCP4-201ENST00000532834 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
SDHCP4-201ENST00000532834 CAPN15O75808 1086 aa12.49□□□□□ -0.41
SDHCP4-201ENST00000532834 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
SDHCP4-201ENST00000532834 DNAJC5Q9H3Z4 198 aa12.48□□□□□ -0.41
SDHCP4-201ENST00000532834 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.42
SDHCP4-201ENST00000532834 TRIM26Q12899 539 aaPredicted RBP12.45□□□□□ -0.42
SDHCP4-201ENST00000532834 LAMC3Q9Y6N6 1575 aa12.44□□□□□ -0.42
SDHCP4-201ENST00000532834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
SDHCP4-201ENST00000532834 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
SDHCP4-201ENST00000532834 CEP162Q5TB80 1403 aa12.44□□□□□ -0.42
SDHCP4-201ENST00000532834 CUX1P39880 1505 aa12.43□□□□□ -0.42
SDHCP4-201ENST00000532834 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
SDHCP4-201ENST00000532834 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
SDHCP4-201ENST00000532834 DSG3P32926 999 aa12.41□□□□□ -0.42
SDHCP4-201ENST00000532834 RUSC2Q8N2Y8 1516 aa12.39□□□□□ -0.43
SDHCP4-201ENST00000532834 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
SDHCP4-201ENST00000532834 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
SDHCP4-201ENST00000532834 HRCP23327 699 aa12.38□□□□□ -0.43
SDHCP4-201ENST00000532834 APLP2Q06481 763 aa12.38□□□□□ -0.43
SDHCP4-201ENST00000532834 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
SDHCP4-201ENST00000532834 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms