RNA–Protein interactions for RNA: ENST00000257248.2

GIF-201, Transcript of gastric intrinsic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIF, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIF-201ENST00000257248 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
GIF-201ENST00000257248 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
GIF-201ENST00000257248 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
GIF-201ENST00000257248 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
GIF-201ENST00000257248 FOXD1Q16676 465 aa15.97■□□□□ 0.15
GIF-201ENST00000257248 NISCHQ9Y2I1 1504 aa15.81■□□□□ 0.12
GIF-201ENST00000257248 MSH5O43196 834 aa15.07■□□□□ 0
GIF-201ENST00000257248 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
GIF-201ENST00000257248 POTEDQ86YR6 584 aa14.94□□□□□ -0.02
GIF-201ENST00000257248 PIAS4Q8N2W9 510 aaPredicted RBP14.87□□□□□ -0.03
GIF-201ENST00000257248 PPP6R1Q9UPN7 881 aa14.77□□□□□ -0.04
GIF-201ENST00000257248 ADRA2BP18089 450 aa14.72□□□□□ -0.05
GIF-201ENST00000257248 CCDC180Q9P1Z9 1646 aa14□□□□□ -0.17
GIF-201ENST00000257248 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
GIF-201ENST00000257248 DMRT2Q9Y5R5 561 aa13.57□□□□□ -0.24
GIF-201ENST00000257248 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
GIF-201ENST00000257248 ABCC9O60706 1549 aa13.45□□□□□ -0.26
GIF-201ENST00000257248 KCNA4P22459 653 aa13.38□□□□□ -0.27
GIF-201ENST00000257248 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
GIF-201ENST00000257248 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
GIF-201ENST00000257248 MYO15BQ96JP2 1530 aa13.16□□□□□ -0.3
GIF-201ENST00000257248 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
GIF-201ENST00000257248 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
GIF-201ENST00000257248 NACADO15069 1562 aa13.12□□□□□ -0.31
GIF-201ENST00000257248 RB1CC1Q8TDY2 1594 aa13.06□□□□□ -0.32
GIF-201ENST00000257248 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
GIF-201ENST00000257248 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
GIF-201ENST00000257248 DCAF8L1A6NGE4 600 aa12.98□□□□□ -0.33
GIF-201ENST00000257248 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
GIF-201ENST00000257248 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
GIF-201ENST00000257248 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
GIF-201ENST00000257248 SLC4A1APQ9BWU0 796 aaKnown RBP12.88□□□□□ -0.35
GIF-201ENST00000257248 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
GIF-201ENST00000257248 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
GIF-201ENST00000257248 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
GIF-201ENST00000257248 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
GIF-201ENST00000257248 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
GIF-201ENST00000257248 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
GIF-201ENST00000257248 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
GIF-201ENST00000257248 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
GIF-201ENST00000257248 SHROOM4Q9ULL8 1493 aa12.63□□□□□ -0.39
GIF-201ENST00000257248 NPM3O75607 178 aaKnown RBP12.62□□□□□ -0.39
GIF-201ENST00000257248 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
GIF-201ENST00000257248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.4□□□□□ -0.42
GIF-201ENST00000257248 EIF4G1Q04637 1599 aaKnown RBP12.32□□□□□ -0.44
GIF-201ENST00000257248 ZBTB22O15209 634 aa12.29□□□□□ -0.44
GIF-201ENST00000257248 CECR2Q9BXF3 1484 aa12.27□□□□□ -0.44
GIF-201ENST00000257248 BAZ1AQ9NRL2 1556 aaPredicted RBP12.24□□□□□ -0.45
GIF-201ENST00000257248 SMARCA4P51532 1647 aa12.23□□□□□ -0.45
GIF-201ENST00000257248 CC2D2AQ9P2K1 1620 aa12.21□□□□□ -0.46
GIF-201ENST00000257248 MROH2BQ7Z745 1585 aa12.17□□□□□ -0.46
GIF-201ENST00000257248 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
GIF-201ENST00000257248 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
GIF-201ENST00000257248 ATAD2BQ9ULI0 1458 aa12.13□□□□□ -0.47
GIF-201ENST00000257248 SMARCA2P51531 1590 aa12.12□□□□□ -0.47
GIF-201ENST00000257248 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
GIF-201ENST00000257248 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
GIF-201ENST00000257248 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
GIF-201ENST00000257248 HMGXB3Q12766 1538 aa12.08□□□□□ -0.48
GIF-201ENST00000257248 WIZO95785 1651 aa12.02□□□□□ -0.48
GIF-201ENST00000257248 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
GIF-201ENST00000257248 CAPN15O75808 1086 aa11.96□□□□□ -0.49
GIF-201ENST00000257248 TOP2AP11388 1531 aaKnown RBP11.95□□□□□ -0.5
GIF-201ENST00000257248 DSG3P32926 999 aa11.93□□□□□ -0.5
GIF-201ENST00000257248 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
GIF-201ENST00000257248 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
GIF-201ENST00000257248 APLP2Q06481 763 aa11.85□□□□□ -0.51
GIF-201ENST00000257248 SUPT5HO00267 1087 aaKnown RBP11.78□□□□□ -0.52
GIF-201ENST00000257248 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
GIF-201ENST00000257248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.52
GIF-201ENST00000257248 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.52
GIF-201ENST00000257248 LAMC3Q9Y6N6 1575 aa11.74□□□□□ -0.53
GIF-201ENST00000257248 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
GIF-201ENST00000257248 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
GIF-201ENST00000257248 CFTRP13569 1480 aa11.73□□□□□ -0.53
GIF-201ENST00000257248 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
GIF-201ENST00000257248 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.53
GIF-201ENST00000257248 NESP48681 1621 aa11.7□□□□□ -0.54
GIF-201ENST00000257248 POTEHQ6S545 545 aa11.68□□□□□ -0.54
GIF-201ENST00000257248 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
GIF-201ENST00000257248 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
GIF-201ENST00000257248 PDS5BQ9NTI5 1447 aa11.63□□□□□ -0.55
GIF-201ENST00000257248 ABCB7O75027 752 aa11.63□□□□□ -0.55
GIF-201ENST00000257248 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
GIF-201ENST00000257248 PRDM2Q13029 1718 aa11.62□□□□□ -0.55
GIF-201ENST00000257248 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
GIF-201ENST00000257248 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
GIF-201ENST00000257248 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
GIF-201ENST00000257248 KIF21AQ7Z4S6 1674 aa11.57□□□□□ -0.56
GIF-201ENST00000257248 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
GIF-201ENST00000257248 THOC2Q8NI27 1593 aaKnown RBP11.55□□□□□ -0.56
GIF-201ENST00000257248 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.57
GIF-201ENST00000257248 WDR62O43379 1518 aa11.51□□□□□ -0.57
GIF-201ENST00000257248 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
GIF-201ENST00000257248 FKBP8Q14318 412 aa11.5□□□□□ -0.57
GIF-201ENST00000257248 URB2Q14146 1524 aaKnown RBP11.48□□□□□ -0.57
GIF-201ENST00000257248 CUX2O14529 1486 aa11.46□□□□□ -0.57
GIF-201ENST00000257248 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
GIF-201ENST00000257248 ABCC8Q09428 1581 aa11.44□□□□□ -0.58
GIF-201ENST00000257248 DNMBPQ6XZF7 1577 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms