RNA–Protein interactions for RNA: ENST00000390629.3

IGHV4-59-201, Transcript of immunoglobulin heavy variable 4-59, humanhuman

APPRIS P1 BASIC

Gene IGHV4-59, Length 495 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-59-201ENST00000390629 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
IGHV4-59-201ENST00000390629 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
IGHV4-59-201ENST00000390629 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
IGHV4-59-201ENST00000390629 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
IGHV4-59-201ENST00000390629 FOXD1Q16676 465 aa17.69■□□□□ 0.42
IGHV4-59-201ENST00000390629 POTEDQ86YR6 584 aa17.1■□□□□ 0.33
IGHV4-59-201ENST00000390629 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
IGHV4-59-201ENST00000390629 MSH5O43196 834 aa16.63■□□□□ 0.25
IGHV4-59-201ENST00000390629 PIAS4Q8N2W9 510 aaPredicted RBP16.37■□□□□ 0.21
IGHV4-59-201ENST00000390629 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
IGHV4-59-201ENST00000390629 ADRA2BP18089 450 aa16.13■□□□□ 0.17
IGHV4-59-201ENST00000390629 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
IGHV4-59-201ENST00000390629 MAPK8IP2Q13387 824 aaPredicted RBP14.97□□□□□ -0.01
IGHV4-59-201ENST00000390629 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
IGHV4-59-201ENST00000390629 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
IGHV4-59-201ENST00000390629 CACNB1Q02641 598 aaPredicted RBP14.57□□□□□ -0.08
IGHV4-59-201ENST00000390629 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
IGHV4-59-201ENST00000390629 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
IGHV4-59-201ENST00000390629 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
IGHV4-59-201ENST00000390629 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
IGHV4-59-201ENST00000390629 ABCC9O60706 1549 aa14.15□□□□□ -0.14
IGHV4-59-201ENST00000390629 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
IGHV4-59-201ENST00000390629 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
IGHV4-59-201ENST00000390629 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
IGHV4-59-201ENST00000390629 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
IGHV4-59-201ENST00000390629 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
IGHV4-59-201ENST00000390629 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
IGHV4-59-201ENST00000390629 DCAF1Q9Y4B6 1507 aa13.86□□□□□ -0.19
IGHV4-59-201ENST00000390629 SHROOM4Q9ULL8 1493 aa13.86□□□□□ -0.19
IGHV4-59-201ENST00000390629 DCAF8L2P0C7V8 631 aa13.61□□□□□ -0.23
IGHV4-59-201ENST00000390629 MYO15BQ96JP2 1530 aa13.56□□□□□ -0.24
IGHV4-59-201ENST00000390629 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
IGHV4-59-201ENST00000390629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.25
IGHV4-59-201ENST00000390629 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
IGHV4-59-201ENST00000390629 NACADO15069 1562 aa13.31□□□□□ -0.28
IGHV4-59-201ENST00000390629 POTEHQ6S545 545 aa13.28□□□□□ -0.28
IGHV4-59-201ENST00000390629 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
IGHV4-59-201ENST00000390629 SCRIBQ14160 1630 aa13.23□□□□□ -0.29
IGHV4-59-201ENST00000390629 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
IGHV4-59-201ENST00000390629 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
IGHV4-59-201ENST00000390629 DSG3P32926 999 aa13.16□□□□□ -0.3
IGHV4-59-201ENST00000390629 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
IGHV4-59-201ENST00000390629 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
IGHV4-59-201ENST00000390629 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
IGHV4-59-201ENST00000390629 CAPN15O75808 1086 aa13.09□□□□□ -0.31
IGHV4-59-201ENST00000390629 RB1CC1Q8TDY2 1594 aa13.08□□□□□ -0.32
IGHV4-59-201ENST00000390629 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
IGHV4-59-201ENST00000390629 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
IGHV4-59-201ENST00000390629 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
IGHV4-59-201ENST00000390629 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
IGHV4-59-201ENST00000390629 BICRAQ9NZM4 1560 aa12.83□□□□□ -0.36
IGHV4-59-201ENST00000390629 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
IGHV4-59-201ENST00000390629 ABCB7O75027 752 aa12.8□□□□□ -0.36
IGHV4-59-201ENST00000390629 WIZO95785 1651 aa12.8□□□□□ -0.36
IGHV4-59-201ENST00000390629 TRHP20396 242 aaPredicted RBP12.78□□□□□ -0.36
IGHV4-59-201ENST00000390629 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
IGHV4-59-201ENST00000390629 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
IGHV4-59-201ENST00000390629 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
IGHV4-59-201ENST00000390629 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
IGHV4-59-201ENST00000390629 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
IGHV4-59-201ENST00000390629 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
IGHV4-59-201ENST00000390629 EIF4G1Q04637 1599 aaKnown RBP12.67□□□□□ -0.38
IGHV4-59-201ENST00000390629 KCNA4P22459 653 aa12.63□□□□□ -0.39
IGHV4-59-201ENST00000390629 APLP2Q06481 763 aa12.61□□□□□ -0.39
IGHV4-59-201ENST00000390629 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
IGHV4-59-201ENST00000390629 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
IGHV4-59-201ENST00000390629 HRCP23327 699 aa12.6□□□□□ -0.39
IGHV4-59-201ENST00000390629 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
IGHV4-59-201ENST00000390629 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
IGHV4-59-201ENST00000390629 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
IGHV4-59-201ENST00000390629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.52□□□□□ -0.41
IGHV4-59-201ENST00000390629 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.41
IGHV4-59-201ENST00000390629 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
IGHV4-59-201ENST00000390629 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
IGHV4-59-201ENST00000390629 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
IGHV4-59-201ENST00000390629 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.42
IGHV4-59-201ENST00000390629 CHRDL2Q6WN34 429 aa12.45□□□□□ -0.42
IGHV4-59-201ENST00000390629 EEA1Q15075 1411 aa12.42□□□□□ -0.42
IGHV4-59-201ENST00000390629 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
IGHV4-59-201ENST00000390629 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.43
IGHV4-59-201ENST00000390629 WRNQ14191 1432 aaPredicted RBP eCLIP12.34□□□□□ -0.43
IGHV4-59-201ENST00000390629 POLA2Q14181 598 aa12.33□□□□□ -0.44
IGHV4-59-201ENST00000390629 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
IGHV4-59-201ENST00000390629 SOGA1O94964 1423 aa12.3□□□□□ -0.44
IGHV4-59-201ENST00000390629 CUX2O14529 1486 aa12.3□□□□□ -0.44
IGHV4-59-201ENST00000390629 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
IGHV4-59-201ENST00000390629 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
IGHV4-59-201ENST00000390629 ZEB1P37275 1124 aaPredicted RBP12.29□□□□□ -0.44
IGHV4-59-201ENST00000390629 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
IGHV4-59-201ENST00000390629 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
IGHV4-59-201ENST00000390629 GOLGA3Q08378 1498 aa12.24□□□□□ -0.45
IGHV4-59-201ENST00000390629 EHMT2Q96KQ7 1210 aa12.24□□□□□ -0.45
IGHV4-59-201ENST00000390629 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
IGHV4-59-201ENST00000390629 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
IGHV4-59-201ENST00000390629 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
IGHV4-59-201ENST00000390629 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.45
IGHV4-59-201ENST00000390629 KIF21BO75037 1637 aa12.2□□□□□ -0.46
IGHV4-59-201ENST00000390629 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
IGHV4-59-201ENST00000390629 TOP2BQ02880 1626 aa12.19□□□□□ -0.46
IGHV4-59-201ENST00000390629 ERCC6Q03468 1493 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms