Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3-BMI1R4GMX3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
COMMD3-BMI1R4GMX3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 AL358852.1-201ENST00000623174 1268 ntBASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3-BMI1R4GMX3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 AC142381.2-201ENST00000566120 298 ntBASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3-BMI1R4GMX3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 AC061975.6-201ENST00000579045 1553 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms