Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 AC092368.3-202ENST00000574180 1591 ntBASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 AC090192.1-201ENST00000517740 490 ntBASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 AC098934.4-201ENST00000564127 592 ntBASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 AC104771.1-201ENST00000603335 964 ntBASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 AC006557.6-201ENST00000623071 864 ntBASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 AC133041.1-202ENST00000642053 222 ntBASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC40Q9H9A6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
LRRC40Q9H9A6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.79
LRRC40Q9H9A6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 AC060766.5-201ENST00000590539 871 ntBASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 AC083880.1-201ENST00000608266 535 ntBASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 TFP1-202ENST00000475455 1573 ntBASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LRRC40Q9H9A6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AC093484.2-201ENST00000580996 2166 ntBASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AC069152.1-201ENST00000438030 544 ntBASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 PNMA6B-201ENST00000538162 1200 ntBASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AC142086.2-201ENST00000569753 217 ntBASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms