Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 POU5F1P3-201ENST00000428824 1078 ntBASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXP3Q9BZS1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
FOXP3Q9BZS1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXP3Q9BZS1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.27■□□□□ 0.83
FOXP3Q9BZS1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.27■□□□□ 0.83
FOXP3Q9BZS1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXP3Q9BZS1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXP3Q9BZS1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 AC004408.2-201ENST00000623613 2777 ntBASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 KRT8P20-201ENST00000423953 1409 ntBASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXP3Q9BZS1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 AC008687.6-201ENST00000596318 630 ntBASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXP3Q9BZS1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 AL512625.2-201ENST00000417533 625 ntBASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 AC092118.2-201ENST00000613495 667 ntBASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 AL032819.2-201ENST00000624543 2162 ntBASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXP3Q9BZS1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms