Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.58■□□□□ 0.25
HDHD3Q9BSH5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDHD3Q9BSH5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.58■□□□□ 0.25
HDHD3Q9BSH5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDHD3Q9BSH5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDHD3Q9BSH5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDHD3Q9BSH5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
HDHD3Q9BSH5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDHD3Q9BSH5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.58■□□□□ 0.25
HDHD3Q9BSH5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 CYP2T1P-201ENST00000432607 1285 ntBASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 KRT18P5-201ENST00000436075 1291 ntBASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 CYP2T3P-201ENST00000601990 817 ntBASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 PHGDH-210ENST00000641115 1638 ntBASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDHD3Q9BSH5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 AC016769.1-201ENST00000409132 1010 ntBASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDHD3Q9BSH5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
HDHD3Q9BSH5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDHD3Q9BSH5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDHD3Q9BSH5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDHD3Q9BSH5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDHD3Q9BSH5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HDHD3Q9BSH5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDHD3Q9BSH5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HDHD3Q9BSH5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.56■□□□□ 0.24
HDHD3Q9BSH5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms