Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDC6Q99741 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.04■□□□□ 0.64
CDC6Q99741 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CDC6Q99741 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC6Q99741 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 RCC2P6-201ENST00000526625 1557 ntBASIC19.03■□□□□ 0.64
CDC6Q99741 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CDC6Q99741 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC6Q99741 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC6Q99741 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC6Q99741 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDC6Q99741 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.03■□□□□ 0.64
CDC6Q99741 MFAP1P1-201ENST00000442257 1255 ntBASIC19.03■□□□□ 0.64
CDC6Q99741 AC009947.2-201ENST00000444014 672 ntBASIC19.03■□□□□ 0.64
CDC6Q99741 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.03■□□□□ 0.64
CDC6Q99741 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
CDC6Q99741 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC6Q99741 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC6Q99741 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDC6Q99741 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.03■□□□□ 0.64
CDC6Q99741 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.02■□□□□ 0.64
CDC6Q99741 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC6Q99741 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC6Q99741 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CDC6Q99741 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.02■□□□□ 0.64
CDC6Q99741 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.02■□□□□ 0.64
CDC6Q99741 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.02■□□□□ 0.64
CDC6Q99741 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.02■□□□□ 0.64
CDC6Q99741 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDC6Q99741 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC6Q99741 AC096733.2-201ENST00000609937 1394 ntBASIC19.02■□□□□ 0.64
CDC6Q99741 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDC6Q99741 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDC6Q99741 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDC6Q99741 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDC6Q99741 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.02■□□□□ 0.63
CDC6Q99741 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDC6Q99741 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.01■□□□□ 0.63
CDC6Q99741 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.01■□□□□ 0.63
CDC6Q99741 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDC6Q99741 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.01■□□□□ 0.63
CDC6Q99741 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.01■□□□□ 0.63
CDC6Q99741 AL121956.5-201ENST00000625261 221 ntBASIC19.01■□□□□ 0.63
CDC6Q99741 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.01■□□□□ 0.63
CDC6Q99741 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC6Q99741 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDC6Q99741 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC6Q99741 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19■□□□□ 0.63
CDC6Q99741 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19■□□□□ 0.63
CDC6Q99741 KRT18P48-201ENST00000434763 852 ntBASIC19■□□□□ 0.63
CDC6Q99741 TPM4P1-201ENST00000436100 807 ntBASIC19■□□□□ 0.63
CDC6Q99741 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19■□□□□ 0.63
CDC6Q99741 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19■□□□□ 0.63
CDC6Q99741 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDC6Q99741 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19■□□□□ 0.63
CDC6Q99741 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19■□□□□ 0.63
CDC6Q99741 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19■□□□□ 0.63
CDC6Q99741 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDC6Q99741 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC6Q99741 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDC6Q99741 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CDC6Q99741 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC6Q99741 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CDC6Q99741 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC6Q99741 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC6Q99741 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC6Q99741 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC6Q99741 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.99■□□□□ 0.63
CDC6Q99741 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.99■□□□□ 0.63
CDC6Q99741 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.99■□□□□ 0.63
CDC6Q99741 AL049796.1-201ENST00000565336 1766 ntBASIC18.99■□□□□ 0.63
CDC6Q99741 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC6Q99741 AC018553.1-201ENST00000616682 1458 ntBASIC18.99■□□□□ 0.63
CDC6Q99741 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms