Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSTQ99698 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSTQ99698 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LYSTQ99698 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSTQ99698 MIR3180-1-201ENST00000580374 94 ntBASIC13.68□□□□□ -0.22
LYSTQ99698 MIR3180-3-201ENST00000584616 94 ntBASIC13.68□□□□□ -0.22
LYSTQ99698 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSTQ99698 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSTQ99698 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSTQ99698 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSTQ99698 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSTQ99698 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSTQ99698 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LYSTQ99698 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
LYSTQ99698 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.68□□□□□ -0.22
LYSTQ99698 RN7SL510P-201ENST00000581311 263 ntBASIC13.68□□□□□ -0.22
LYSTQ99698 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSTQ99698 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSTQ99698 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSTQ99698 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSTQ99698 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LYSTQ99698 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.68□□□□□ -0.22
LYSTQ99698 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LYSTQ99698 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSTQ99698 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSTQ99698 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LYSTQ99698 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.67□□□□□ -0.22
LYSTQ99698 HYMAI.1-201ENST00000620949 238 ntBASIC13.67□□□□□ -0.22
LYSTQ99698 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSTQ99698 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSTQ99698 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSTQ99698 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 AP002982.1-201ENST00000492365 877 ntBASIC13.67□□□□□ -0.22
LYSTQ99698 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSTQ99698 AC104692.2-201ENST00000603054 253 ntBASIC13.67□□□□□ -0.22
LYSTQ99698 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LYSTQ99698 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSTQ99698 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSTQ99698 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSTQ99698 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSTQ99698 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LYSTQ99698 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 AC009078.2-202ENST00000463353 338 ntBASIC13.66□□□□□ -0.22
LYSTQ99698 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSTQ99698 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSTQ99698 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSTQ99698 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 Z98882.1-201ENST00000622160 2253 ntBASIC13.66□□□□□ -0.22
LYSTQ99698 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSTQ99698 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LYSTQ99698 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSTQ99698 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LYSTQ99698 EMBP1-201ENST00000458200 901 ntBASIC13.66□□□□□ -0.22
LYSTQ99698 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSTQ99698 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.66□□□□□ -0.22
LYSTQ99698 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSTQ99698 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSTQ99698 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
LYSTQ99698 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSTQ99698 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 FEM1AP4-201ENST00000443167 1987 ntBASIC13.65□□□□□ -0.22
LYSTQ99698 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LYSTQ99698 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
LYSTQ99698 AC092338.2-201ENST00000568827 1415 ntBASIC13.65□□□□□ -0.22
LYSTQ99698 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.65□□□□□ -0.22
LYSTQ99698 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSTQ99698 AC096733.2-201ENST00000609937 1394 ntBASIC13.65□□□□□ -0.22
LYSTQ99698 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LYSTQ99698 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms