Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 AC060766.5-201ENST00000590539 871 ntBASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 AC133041.1-202ENST00000642053 222 ntBASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB18PQ96TA0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB18PQ96TA0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 HLA-L-209ENST00000420110 1011 ntBASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB18PQ96TA0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 AL032819.2-201ENST00000624543 2162 ntBASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PCDHB18PQ96TA0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB18PQ96TA0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB18PQ96TA0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB18PQ96TA0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB18PQ96TA0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB18PQ96TA0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB18PQ96TA0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB18PQ96TA0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms