Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC12.41□□□□□ -0.42
SVIPQ8NHG7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 SSR4P1-203ENST00000599569 2260 ntBASIC12.4□□□□□ -0.42
SVIPQ8NHG7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.4□□□□□ -0.42
SVIPQ8NHG7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
SVIPQ8NHG7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SVIPQ8NHG7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SVIPQ8NHG7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.4□□□□□ -0.43
SVIPQ8NHG7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
SVIPQ8NHG7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 ANOS2P-203ENST00000472227 1816 ntBASIC12.39□□□□□ -0.43
SVIPQ8NHG7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 MKRN4P-201ENST00000444706 1521 ntBASIC12.39□□□□□ -0.43
SVIPQ8NHG7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 AC015819.3-201ENST00000624305 2674 ntBASIC12.39□□□□□ -0.43
SVIPQ8NHG7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 AL357033.4-201ENST00000617703 1807 ntBASIC12.39□□□□□ -0.43
SVIPQ8NHG7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SVIPQ8NHG7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms