Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 TUBB8P6-201ENST00000436895 1288 ntBASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAM1L1Q8N609 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRAM1L1Q8N609 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAM1L1Q8N609 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 RARRES2P10-201ENST00000564312 460 ntBASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAM1L1Q8N609 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms