Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 AC009237.14-201ENST00000609975 1594 ntBASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTCHD4Q6ZW05 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 AL591742.1-201ENST00000604433 565 ntBASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 AL032819.2-201ENST00000624543 2162 ntBASIC18.06■□□□□ 0.48
PTCHD4Q6ZW05 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
PTCHD4Q6ZW05 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 AC016405.3-201ENST00000607710 860 ntBASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCHD4Q6ZW05 AC087633.2-202ENST00000565166 1439 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms