Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 Z82202.1-201ENST00000623446 1880 ntBASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXR1Q6PIV2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 AC138907.5-202ENST00000569484 235 ntBASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXR1Q6PIV2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 AC133552.2-202ENST00000575694 574 ntBASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXR1Q6PIV2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FOXR1Q6PIV2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
FOXR1Q6PIV2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 KRT18P20-201ENST00000548986 1279 ntBASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 AC009113.1-201ENST00000570267 2443 ntBASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXR1Q6PIV2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms