Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 FAM210CP-201ENST00000445714 574 ntBASIC23.66■■□□□ 1.38
PDS5AQ29RF7 AC011506.1-201ENST00000474329 610 ntBASIC23.66■■□□□ 1.38
PDS5AQ29RF7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 AC145285.6-201ENST00000604632 637 ntBASIC23.66■■□□□ 1.38
PDS5AQ29RF7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.66■■□□□ 1.38
PDS5AQ29RF7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 KRT8P9-201ENST00000558927 1449 ntBASIC23.66■■□□□ 1.38
PDS5AQ29RF7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.66■■□□□ 1.38
PDS5AQ29RF7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDS5AQ29RF7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
PDS5AQ29RF7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDS5AQ29RF7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.64■■□□□ 1.38
PDS5AQ29RF7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.64■■□□□ 1.38
PDS5AQ29RF7 RCC2P6-201ENST00000526625 1557 ntBASIC23.64■■□□□ 1.38
PDS5AQ29RF7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDS5AQ29RF7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDS5AQ29RF7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDS5AQ29RF7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDS5AQ29RF7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDS5AQ29RF7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDS5AQ29RF7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.64■■□□□ 1.37
PDS5AQ29RF7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PDS5AQ29RF7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PDS5AQ29RF7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.64■■□□□ 1.37
PDS5AQ29RF7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDS5AQ29RF7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.63■■□□□ 1.37
PDS5AQ29RF7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDS5AQ29RF7 MIR1238-201ENST00000408483 83 ntBASIC23.63■■□□□ 1.37
PDS5AQ29RF7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDS5AQ29RF7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDS5AQ29RF7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDS5AQ29RF7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDS5AQ29RF7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 Z85996.1-201ENST00000494644 937 ntBASIC23.62■■□□□ 1.37
PDS5AQ29RF7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.62■■□□□ 1.37
PDS5AQ29RF7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 AC130371.2-201ENST00000619443 611 ntBASIC23.61■■□□□ 1.37
PDS5AQ29RF7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PDS5AQ29RF7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms