Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HMGA2P52926 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
HMGA2P52926 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGA2P52926 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HMGA2P52926 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HMGA2P52926 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HMGA2P52926 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.46
HMGA2P52926 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HMGA2P52926 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGA2P52926 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HMGA2P52926 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HMGA2P52926 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGA2P52926 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGA2P52926 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.95■□□□□ 0.46
HMGA2P52926 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 AC034268.1-201ENST00000441047 882 ntBASIC17.95■□□□□ 0.46
HMGA2P52926 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA2P52926 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGA2P52926 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGA2P52926 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGA2P52926 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGA2P52926 AC018553.1-201ENST00000616682 1458 ntBASIC17.95■□□□□ 0.46
HMGA2P52926 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HMGA2P52926 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HMGA2P52926 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HMGA2P52926 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGA2P52926 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.94■□□□□ 0.46
HMGA2P52926 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.94■□□□□ 0.46
HMGA2P52926 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 AC116351.2-201ENST00000606540 1585 ntBASIC17.94■□□□□ 0.46
HMGA2P52926 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
HMGA2P52926 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HMGA2P52926 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA2P52926 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HMGA2P52926 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HMGA2P52926 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HMGA2P52926 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA2P52926 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HMGA2P52926 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.93■□□□□ 0.46
HMGA2P52926 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HMGA2P52926 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGA2P52926 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HMGA2P52926 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.93■□□□□ 0.46
HMGA2P52926 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGA2P52926 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA2P52926 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA2P52926 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
HMGA2P52926 AL589743.5-201ENST00000616611 1050 ntBASIC17.93■□□□□ 0.46
HMGA2P52926 AC006333.2-201ENST00000607957 2099 ntBASIC17.93■□□□□ 0.46
HMGA2P52926 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA2P52926 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGA2P52926 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HMGA2P52926 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGA2P52926 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA2P52926 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA2P52926 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms