Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
IGKV3-11P04433 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV3-11P04433 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV3-11P04433 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV3-11P04433 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.21■□□□□ 0.51
IGKV3-11P04433 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV3-11P04433 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
IGKV3-11P04433 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
IGKV3-11P04433 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
IGKV3-11P04433 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
IGKV3-11P04433 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3-11P04433 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3-11P04433 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 PCDHAC2-203ENST00000615316 3011 ntBASIC18.2■□□□□ 0.5
IGKV3-11P04433 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3-11P04433 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 RARRES2P10-201ENST00000564312 460 ntBASIC18.2■□□□□ 0.5
IGKV3-11P04433 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3-11P04433 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3-11P04433 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3-11P04433 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.2■□□□□ 0.5
IGKV3-11P04433 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.19■□□□□ 0.5
IGKV3-11P04433 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
IGKV3-11P04433 TUBB8P6-201ENST00000436895 1288 ntBASIC18.19■□□□□ 0.5
IGKV3-11P04433 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.19■□□□□ 0.5
IGKV3-11P04433 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
IGKV3-11P04433 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
IGKV3-11P04433 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.19■□□□□ 0.5
IGKV3-11P04433 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
IGKV3-11P04433 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
IGKV3-11P04433 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV3-11P04433 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.18■□□□□ 0.5
IGKV3-11P04433 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.18■□□□□ 0.5
IGKV3-11P04433 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.18■□□□□ 0.5
IGKV3-11P04433 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.18■□□□□ 0.5
IGKV3-11P04433 C1QL1P1-201ENST00000568105 661 ntBASIC18.18■□□□□ 0.5
IGKV3-11P04433 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
IGKV3-11P04433 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
IGKV3-11P04433 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3-11P04433 AC125437.2-201ENST00000625180 2167 ntBASIC18.18■□□□□ 0.5
IGKV3-11P04433 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.18■□□□□ 0.5
IGKV3-11P04433 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.18■□□□□ 0.5
IGKV3-11P04433 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.18■□□□□ 0.5
IGKV3-11P04433 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.17■□□□□ 0.5
IGKV3-11P04433 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
IGKV3-11P04433 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.17■□□□□ 0.5
IGKV3-11P04433 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
IGKV3-11P04433 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.17■□□□□ 0.5
IGKV3-11P04433 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.17■□□□□ 0.5
IGKV3-11P04433 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IGKV3-11P04433 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.17■□□□□ 0.5
IGKV3-11P04433 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV3-11P04433 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms