Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FEM1AP1-201ENST00000431297 1995 ntBASIC17.46■□□□□ 0.39
CNOT4O95628 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.46■□□□□ 0.39
CNOT4O95628 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 BX119927.1-201ENST00000636596 1552 ntBASIC17.46■□□□□ 0.39
CNOT4O95628 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 ECEL1P3-201ENST00000427961 737 ntBASIC17.46■□□□□ 0.39
CNOT4O95628 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.46■□□□□ 0.39
CNOT4O95628 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT4O95628 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.46■□□□□ 0.39
CNOT4O95628 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT4O95628 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT4O95628 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.46■□□□□ 0.39
CNOT4O95628 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CNOT4O95628 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.46■□□□□ 0.39
CNOT4O95628 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT4O95628 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT4O95628 PHGDH-210ENST00000641115 1638 ntBASIC17.46■□□□□ 0.39
CNOT4O95628 SMG8-203ENST00000578922 2178 ntBASIC17.46■□□□□ 0.39
CNOT4O95628 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CNOT4O95628 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.46■□□□□ 0.38
CNOT4O95628 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNOT4O95628 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CNOT4O95628 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CNOT4O95628 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT4O95628 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT4O95628 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT4O95628 AC004264.1-201ENST00000608354 794 ntBASIC17.45■□□□□ 0.38
CNOT4O95628 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 AC073314.1-201ENST00000568729 2216 ntBASIC17.45■□□□□ 0.38
CNOT4O95628 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CNOT4O95628 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT4O95628 AL135905.2-201ENST00000584934 1404 ntBASIC17.45■□□□□ 0.38
CNOT4O95628 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CNOT4O95628 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CNOT4O95628 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT4O95628 AC124283.5-201ENST00000624661 1809 ntBASIC17.44■□□□□ 0.38
CNOT4O95628 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CNOT4O95628 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CNOT4O95628 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.44■□□□□ 0.38
CNOT4O95628 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 HCG11-201ENST00000411553 5696 ntBASIC17.44■□□□□ 0.38
CNOT4O95628 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CNOT4O95628 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.44■□□□□ 0.38
CNOT4O95628 KRASP1-201ENST00000407852 552 ntBASIC17.44■□□□□ 0.38
CNOT4O95628 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.44■□□□□ 0.38
CNOT4O95628 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.44■□□□□ 0.38
CNOT4O95628 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.44■□□□□ 0.38
CNOT4O95628 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT4O95628 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.44■□□□□ 0.38
CNOT4O95628 LINC01521-201ENST00000504184 1943 ntBASIC17.44■□□□□ 0.38
CNOT4O95628 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.44■□□□□ 0.38
CNOT4O95628 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT4O95628 NBPF21P-201ENST00000425093 1451 ntBASIC17.44■□□□□ 0.38
CNOT4O95628 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.44■□□□□ 0.38
CNOT4O95628 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT4O95628 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CNOT4O95628 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms