Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COPEO14579 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.66■□□□□ 0.74
COPEO14579 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPEO14579 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPEO14579 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPEO14579 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPEO14579 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPEO14579 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COPEO14579 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
COPEO14579 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COPEO14579 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COPEO14579 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.65■□□□□ 0.74
COPEO14579 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COPEO14579 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.65■□□□□ 0.74
COPEO14579 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 AC016405.3-201ENST00000607710 860 ntBASIC19.65■□□□□ 0.74
COPEO14579 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 AC010536.3-201ENST00000620306 533 ntBASIC19.65■□□□□ 0.74
COPEO14579 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.65■□□□□ 0.74
COPEO14579 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COPEO14579 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COPEO14579 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPEO14579 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.64■□□□□ 0.74
COPEO14579 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COPEO14579 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
COPEO14579 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COPEO14579 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COPEO14579 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
COPEO14579 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.64■□□□□ 0.73
COPEO14579 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.64■□□□□ 0.73
COPEO14579 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.64■□□□□ 0.73
COPEO14579 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.64■□□□□ 0.73
COPEO14579 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPEO14579 AL162412.1-201ENST00000567129 965 ntBASIC19.64■□□□□ 0.73
COPEO14579 KRT18P61-201ENST00000585825 1298 ntBASIC19.64■□□□□ 0.73
COPEO14579 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COPEO14579 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COPEO14579 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPEO14579 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPEO14579 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.64■□□□□ 0.73
COPEO14579 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPEO14579 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPEO14579 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.64■□□□□ 0.73
COPEO14579 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.64■□□□□ 0.73
COPEO14579 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.64■□□□□ 0.73
COPEO14579 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPEO14579 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPEO14579 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COPEO14579 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COPEO14579 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
COPEO14579 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COPEO14579 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COPEO14579 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.63■□□□□ 0.73
COPEO14579 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COPEO14579 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COPEO14579 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.63■□□□□ 0.73
COPEO14579 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COPEO14579 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPEO14579 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.62■□□□□ 0.73
COPEO14579 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
COPEO14579 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 HCG11-201ENST00000411553 5696 ntBASIC19.62■□□□□ 0.73
COPEO14579 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 HLA-G-202ENST00000376815 851 ntBASIC19.62■□□□□ 0.73
COPEO14579 HLA-G-203ENST00000376818 1127 ntBASIC19.62■□□□□ 0.73
COPEO14579 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.62■□□□□ 0.73
COPEO14579 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms