Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DUXBA0A1W2PPF3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 AC005082.1-201ENST00000413042 2259 ntBASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 PHGDH-210ENST00000641115 1638 ntBASIC16.05■□□□□ 0.16
DUXBA0A1W2PPF3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 HLA-G-202ENST00000376815 851 ntBASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 HLA-G-203ENST00000376818 1127 ntBASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 AL031432.3-201ENST00000607698 485 ntBASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
DUXBA0A1W2PPF3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 AC026471.1-201ENST00000564629 3026 ntBASIC16.03■□□□□ 0.16
DUXBA0A1W2PPF3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms