Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MIR4433B-201ENST00000581329 102 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC008521.2-201ENST00000591021 259 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 COX6CP7-201ENST00000597056 208 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC093388.1-201ENST00000609166 430 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC026124.2-201ENST00000621847 656 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTR9Q6PD62 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTR9Q6PD62 PARP4P2-201ENST00000446672 3326 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AL031985.1-201ENST00000392713 418 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC245060.4-201ENST00000413293 1121 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 CDY17P-201ENST00000414121 1282 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 RPS26P38-201ENST00000414476 348 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC104843.2-201ENST00000427666 297 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 RN7SL57P-201ENST00000493687 290 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 NPM1P21-201ENST00000513394 762 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC097486.1-201ENST00000515331 210 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 IGLV3-30-201ENST00000524362 298 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC091078.2-201ENST00000557145 559 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 ZNF322P1-201ENST00000568013 1209 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 OR8G3P-202ENST00000641572 1255 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTR9Q6PD62 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTR9Q6PD62 AC092070.2-203ENST00000598377 3644 ntBASIC7.04□□□□□ -1.28
CTR9Q6PD62 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTR9Q6PD62 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CTR9Q6PD62 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 RNF19BPY-201ENST00000458209 1550 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AL355834.1-201ENST00000556602 3965 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 RN7SKP292-201ENST00000365522 317 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 AL360271.1-201ENST00000395679 510 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 LDHBP3-201ENST00000514909 822 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 IGKV3D-34-201ENST00000522638 302 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 GTF2IP11-201ENST00000526931 420 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AL512356.3-201ENST00000623005 461 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 OR11H2-202ENST00000641517 1085 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 AC087516.1-201ENST00000561236 2428 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 PDZK1P1-202ENST00000425209 1350 ntBASIC7.03□□□□□ -1.28
CTR9Q6PD62 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
CTR9Q6PD62 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTR9Q6PD62 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.02□□□□□ -1.28
CTR9Q6PD62 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.28
CTR9Q6PD62 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.28
CTR9Q6PD62 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms