RNA–Protein interactions for RNA: ENST00000588495.5

PCAT19-201, prostate cancer associated transcript 19, humanhuman

TSL 1 (best) BASIC

Gene PCAT19, Length 3,472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT19-201ENST00000588495 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
PCAT19-201ENST00000588495 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
PCAT19-201ENST00000588495 PHF23Q9BUL5 403 aaPredicted RBP13.95□□□□□ -0.18
PCAT19-201ENST00000588495 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
PCAT19-201ENST00000588495 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
PCAT19-201ENST00000588495 KCNA4P22459 653 aa12.98□□□□□ -0.33
PCAT19-201ENST00000588495 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
PCAT19-201ENST00000588495 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
PCAT19-201ENST00000588495 ADRA2BP18089 450 aa12.66□□□□□ -0.38
PCAT19-201ENST00000588495 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
PCAT19-201ENST00000588495 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
PCAT19-201ENST00000588495 SENP3Q9H4L4 574 aaPredicted RBP12.18□□□□□ -0.46
PCAT19-201ENST00000588495 PPP6R1Q9UPN7 881 aa12.13□□□□□ -0.47
PCAT19-201ENST00000588495 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
PCAT19-201ENST00000588495 ZBTB22O15209 634 aa12□□□□□ -0.49
PCAT19-201ENST00000588495 PRKCSHP14314 528 aaPredicted RBP11.91□□□□□ -0.5
PCAT19-201ENST00000588495 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
PCAT19-201ENST00000588495 CCDC180Q9P1Z9 1646 aa11.7□□□□□ -0.54
PCAT19-201ENST00000588495 NPM3O75607 178 aaKnown RBP11.69□□□□□ -0.54
PCAT19-201ENST00000588495 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
PCAT19-201ENST00000588495 FKBP8Q14318 412 aa11.56□□□□□ -0.56
PCAT19-201ENST00000588495 FOXD1Q16676 465 aa11.47□□□□□ -0.57
PCAT19-201ENST00000588495 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
PCAT19-201ENST00000588495 DAXXQ9UER7 740 aaPredicted RBP11.37□□□□□ -0.59
PCAT19-201ENST00000588495 TAOK2Q9UL54 1235 aa11.35□□□□□ -0.59
PCAT19-201ENST00000588495 TPRNQ4KMQ1 711 aa11.33□□□□□ -0.6
PCAT19-201ENST00000588495 NISCHQ9Y2I1 1504 aa11.33□□□□□ -0.6
PCAT19-201ENST00000588495 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
PCAT19-201ENST00000588495 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
PCAT19-201ENST00000588495 DCAF8L2P0C7V8 631 aa11.26□□□□□ -0.61
PCAT19-201ENST00000588495 TIMELESSQ9UNS1 1208 aa11.26□□□□□ -0.61
PCAT19-201ENST00000588495 BCANQ96GW7 911 aa11.21□□□□□ -0.61
PCAT19-201ENST00000588495 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.62
PCAT19-201ENST00000588495 SHROOM4Q9ULL8 1493 aa11.2□□□□□ -0.62
PCAT19-201ENST00000588495 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
PCAT19-201ENST00000588495 PIAS4Q8N2W9 510 aaPredicted RBP11.16□□□□□ -0.62
PCAT19-201ENST00000588495 FBLN2P98095 1184 aa10.99□□□□□ -0.65
PCAT19-201ENST00000588495 CNKSR2Q8WXI2 1034 aa10.95□□□□□ -0.66
PCAT19-201ENST00000588495 KDM2AQ9Y2K7 1162 aa10.94□□□□□ -0.66
PCAT19-201ENST00000588495 MAPK8IP2Q13387 824 aaPredicted RBP10.83□□□□□ -0.68
PCAT19-201ENST00000588495 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
PCAT19-201ENST00000588495 ARXQ96QS3 562 aa10.79□□□□□ -0.68
PCAT19-201ENST00000588495 CFAP44Q96MT7 982 aa10.77□□□□□ -0.68
PCAT19-201ENST00000588495 PELP1Q8IZL8 1130 aaKnown RBP10.77□□□□□ -0.69
PCAT19-201ENST00000588495 VSIG10Q8N0Z9 540 aa10.76□□□□□ -0.69
PCAT19-201ENST00000588495 MYT1Q01538 1121 aa10.76□□□□□ -0.69
PCAT19-201ENST00000588495 TTBK1Q5TCY1 1321 aaPredicted RBP10.74□□□□□ -0.69
PCAT19-201ENST00000588495 SLC4A2P04920 1241 aa10.74□□□□□ -0.69
PCAT19-201ENST00000588495 ERICH6Q7L0X2 663 aa10.74□□□□□ -0.69
PCAT19-201ENST00000588495 APLP2Q06481 763 aa10.72□□□□□ -0.69
PCAT19-201ENST00000588495 PAXIP1Q6ZW49 1069 aaPredicted RBP10.71□□□□□ -0.69
PCAT19-201ENST00000588495 DCAF1Q9Y4B6 1507 aa10.69□□□□□ -0.7
PCAT19-201ENST00000588495 HOMEZQ8IX15 550 aa10.64□□□□□ -0.71
PCAT19-201ENST00000588495 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
PCAT19-201ENST00000588495 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
PCAT19-201ENST00000588495 SUPT5HO00267 1087 aaKnown RBP10.6□□□□□ -0.71
PCAT19-201ENST00000588495 RANGAP1P46060 587 aaPredicted RBP10.6□□□□□ -0.71
PCAT19-201ENST00000588495 ATF5Q9Y2D1 282 aaPredicted RBP10.6□□□□□ -0.71
PCAT19-201ENST00000588495 C14orf37Q86TY3 774 aa10.59□□□□□ -0.71
PCAT19-201ENST00000588495 SCAF1Q9H7N4 1312 aaKnown RBP10.57□□□□□ -0.72
PCAT19-201ENST00000588495 PKD2Q13563 968 aa10.56□□□□□ -0.72
PCAT19-201ENST00000588495 NPM1P06748 294 aaKnown RBP eCLIP10.55□□□□□ -0.72
PCAT19-201ENST00000588495 TMEM132AQ24JP5 1023 aa10.52□□□□□ -0.72
PCAT19-201ENST00000588495 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
PCAT19-201ENST00000588495 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.5□□□□□ -0.73
PCAT19-201ENST00000588495 MYCNP04198 464 aaPredicted RBP10.49□□□□□ -0.73
PCAT19-201ENST00000588495 NBR1Q14596 966 aa10.48□□□□□ -0.73
PCAT19-201ENST00000588495 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
PCAT19-201ENST00000588495 VASPP50552 380 aaPredicted RBP10.45□□□□□ -0.74
PCAT19-201ENST00000588495 ATXN8OSP0DMR3 200 aa10.43□□□□□ -0.74
PCAT19-201ENST00000588495 NACADO15069 1562 aa10.41□□□□□ -0.74
PCAT19-201ENST00000588495 KLHL34Q8N239 644 aa10.41□□□□□ -0.74
PCAT19-201ENST00000588495 RNF216Q9NWF9 866 aaPredicted RBP10.41□□□□□ -0.74
PCAT19-201ENST00000588495 FBXO3Q9UK99 471 aa10.35□□□□□ -0.75
PCAT19-201ENST00000588495 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
PCAT19-201ENST00000588495 SPRYD3Q8NCJ5 442 aa10.32□□□□□ -0.76
PCAT19-201ENST00000588495 ECM2O94769 699 aaPredicted RBP10.31□□□□□ -0.76
PCAT19-201ENST00000588495 UBTFP17480 764 aaKnown RBP10.31□□□□□ -0.76
PCAT19-201ENST00000588495 EIF5BO60841 1220 aaKnown RBP10.3□□□□□ -0.76
PCAT19-201ENST00000588495 DNAJC5BQ9UF47 199 aa10.3□□□□□ -0.76
PCAT19-201ENST00000588495 SPDYE4A6NLX3 237 aa10.28□□□□□ -0.76
PCAT19-201ENST00000588495 RGL2O15211 777 aa10.28□□□□□ -0.76
PCAT19-201ENST00000588495 TRIM26Q12899 539 aaPredicted RBP10.25□□□□□ -0.77
PCAT19-201ENST00000588495 CHGAP10645 457 aaKnown RBP10.23□□□□□ -0.77
PCAT19-201ENST00000588495 TRHP20396 242 aaPredicted RBP10.2□□□□□ -0.78
PCAT19-201ENST00000588495 NPM2Q86SE8 214 aaKnown RBP10.19□□□□□ -0.78
PCAT19-201ENST00000588495 RB1CC1Q8TDY2 1594 aa10.19□□□□□ -0.78
PCAT19-201ENST00000588495 ARID3AQ99856 593 aa10.17□□□□□ -0.78
PCAT19-201ENST00000588495 HRCP23327 699 aa10.08□□□□□ -0.8
PCAT19-201ENST00000588495 BICRAQ9NZM4 1560 aa10.08□□□□□ -0.8
PCAT19-201ENST00000588495 HOXD11P31277 338 aaPredicted RBP10.05□□□□□ -0.8
PCAT19-201ENST00000588495 DCAF8L1A6NGE4 600 aa10.04□□□□□ -0.8
PCAT19-201ENST00000588495 MKRN4PQ13434 485 aaPredicted RBP10.03□□□□□ -0.8
PCAT19-201ENST00000588495 PLEKHG5O94827 1062 aa10□□□□□ -0.81
PCAT19-201ENST00000588495 TRIM41Q8WV44 630 aa9.99□□□□□ -0.81
PCAT19-201ENST00000588495 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
PCAT19-201ENST00000588495 CIZ1Q9ULV3 898 aaPredicted RBP9.98□□□□□ -0.81
PCAT19-201ENST00000588495 PEG3Q9GZU2 1588 aa9.98□□□□□ -0.81
PCAT19-201ENST00000588495 ZNF219Q9P2Y4 722 aaPredicted RBP9.97□□□□□ -0.81
PCAT19-201ENST00000588495 SPOCK2Q92563 424 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms