RNA–Protein interactions for RNA: ENST00000425564.2

C3orf35-203, Transcript of chromosome 3 open reading frame 35, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C3orf35, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf35-203ENST00000425564 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
C3orf35-203ENST00000425564 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
C3orf35-203ENST00000425564 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
C3orf35-203ENST00000425564 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
C3orf35-203ENST00000425564 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.2
C3orf35-203ENST00000425564 FOXD1Q16676 465 aa15.95■□□□□ 0.14
C3orf35-203ENST00000425564 NISCHQ9Y2I1 1504 aa15.61■□□□□ 0.09
C3orf35-203ENST00000425564 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
C3orf35-203ENST00000425564 ADRA2BP18089 450 aa15.41■□□□□ 0.06
C3orf35-203ENST00000425564 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
C3orf35-203ENST00000425564 POTEDQ86YR6 584 aa14.96□□□□□ -0.02
C3orf35-203ENST00000425564 ABCC9O60706 1549 aa14.82□□□□□ -0.04
C3orf35-203ENST00000425564 MSH5O43196 834 aa14.72□□□□□ -0.05
C3orf35-203ENST00000425564 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
C3orf35-203ENST00000425564 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
C3orf35-203ENST00000425564 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
C3orf35-203ENST00000425564 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
C3orf35-203ENST00000425564 KCNA4P22459 653 aa14.11□□□□□ -0.15
C3orf35-203ENST00000425564 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
C3orf35-203ENST00000425564 MAPK8IP2Q13387 824 aaPredicted RBP13.94□□□□□ -0.18
C3orf35-203ENST00000425564 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
C3orf35-203ENST00000425564 RB1CC1Q8TDY2 1594 aa13.85□□□□□ -0.19
C3orf35-203ENST00000425564 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
C3orf35-203ENST00000425564 NPM3O75607 178 aaKnown RBP13.79□□□□□ -0.2
C3orf35-203ENST00000425564 DMRT2Q9Y5R5 561 aa13.78□□□□□ -0.2
C3orf35-203ENST00000425564 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
C3orf35-203ENST00000425564 NACADO15069 1562 aa13.64□□□□□ -0.23
C3orf35-203ENST00000425564 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
C3orf35-203ENST00000425564 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
C3orf35-203ENST00000425564 BICRAQ9NZM4 1560 aa13.48□□□□□ -0.25
C3orf35-203ENST00000425564 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
C3orf35-203ENST00000425564 UNC13AQ9UPW8 1703 aa13.45□□□□□ -0.26
C3orf35-203ENST00000425564 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
C3orf35-203ENST00000425564 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
C3orf35-203ENST00000425564 CC2D2AQ9P2K1 1620 aa13.34□□□□□ -0.27
C3orf35-203ENST00000425564 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
C3orf35-203ENST00000425564 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
C3orf35-203ENST00000425564 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
C3orf35-203ENST00000425564 EIF4G1Q04637 1599 aaKnown RBP13.18□□□□□ -0.3
C3orf35-203ENST00000425564 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
C3orf35-203ENST00000425564 CUX2O14529 1486 aa13.07□□□□□ -0.32
C3orf35-203ENST00000425564 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
C3orf35-203ENST00000425564 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
C3orf35-203ENST00000425564 ZBTB22O15209 634 aa12.98□□□□□ -0.33
C3orf35-203ENST00000425564 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
C3orf35-203ENST00000425564 SCRIBQ14160 1630 aa12.89□□□□□ -0.35
C3orf35-203ENST00000425564 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
C3orf35-203ENST00000425564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.359e-7■■■□□ 16.7
C3orf35-203ENST00000425564 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
C3orf35-203ENST00000425564 ERCC6Q03468 1493 aa12.83□□□□□ -0.36
C3orf35-203ENST00000425564 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
C3orf35-203ENST00000425564 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
C3orf35-203ENST00000425564 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
C3orf35-203ENST00000425564 NCAPD3P42695 1498 aa12.63□□□□□ -0.39
C3orf35-203ENST00000425564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
C3orf35-203ENST00000425564 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
C3orf35-203ENST00000425564 RNF39Q9H2S5 420 aa12.6□□□□□ -0.39
C3orf35-203ENST00000425564 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
C3orf35-203ENST00000425564 NESP48681 1621 aa12.55□□□□□ -0.4
C3orf35-203ENST00000425564 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
C3orf35-203ENST00000425564 THOC2Q8NI27 1593 aaKnown RBP12.54□□□□□ -0.4
C3orf35-203ENST00000425564 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
C3orf35-203ENST00000425564 ATAD2BQ9ULI0 1458 aa12.47□□□□□ -0.41
C3orf35-203ENST00000425564 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
C3orf35-203ENST00000425564 APLP2Q06481 763 aa12.46□□□□□ -0.41
C3orf35-203ENST00000425564 HMGXB3Q12766 1538 aa12.44□□□□□ -0.42
C3orf35-203ENST00000425564 SMARCA2P51531 1590 aa12.4□□□□□ -0.42
C3orf35-203ENST00000425564 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
C3orf35-203ENST00000425564 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
C3orf35-203ENST00000425564 PDS5BQ9NTI5 1447 aa12.37□□□□□ -0.43
C3orf35-203ENST00000425564 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
C3orf35-203ENST00000425564 BAZ1AQ9NRL2 1556 aaPredicted RBP12.32□□□□□ -0.44
C3orf35-203ENST00000425564 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
C3orf35-203ENST00000425564 BAZ1BQ9UIG0 1483 aaKnown RBP12.3□□□□□ -0.44
C3orf35-203ENST00000425564 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
C3orf35-203ENST00000425564 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.44
C3orf35-203ENST00000425564 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
C3orf35-203ENST00000425564 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
C3orf35-203ENST00000425564 WDR62O43379 1518 aa12.26□□□□□ -0.45
C3orf35-203ENST00000425564 CAPN15O75808 1086 aa12.24□□□□□ -0.45
C3orf35-203ENST00000425564 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
C3orf35-203ENST00000425564 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
C3orf35-203ENST00000425564 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
C3orf35-203ENST00000425564 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
C3orf35-203ENST00000425564 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
C3orf35-203ENST00000425564 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
C3orf35-203ENST00000425564 ARHGEF11O15085 1522 aa12.14□□□□□ -0.47
C3orf35-203ENST00000425564 CYB5RLQ6IPT4 315 aa12.11□□□□□ -0.47
C3orf35-203ENST00000425564 CEP164Q9UPV0 1460 aa12.09□□□□□ -0.47
C3orf35-203ENST00000425564 POLA2Q14181 598 aa12.04□□□□□ -0.48
C3orf35-203ENST00000425564 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
C3orf35-203ENST00000425564 DSG3P32926 999 aa12.03□□□□□ -0.48
C3orf35-203ENST00000425564 ABCB7O75027 752 aa12□□□□□ -0.49
C3orf35-203ENST00000425564 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
C3orf35-203ENST00000425564 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
C3orf35-203ENST00000425564 URB2Q14146 1524 aaKnown RBP11.98□□□□□ -0.49
C3orf35-203ENST00000425564 CFTRP13569 1480 aa11.93□□□□□ -0.5
C3orf35-203ENST00000425564 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
C3orf35-203ENST00000425564 RSF1Q96T23 1441 aaPredicted RBP11.91□□□□□ -0.5
C3orf35-203ENST00000425564 IFT140Q96RY7 1462 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms