RNA–Protein interactions for RNA: ENST00000448696.4

IFNE-201, Transcript of interferon epsilon, humanhuman

APPRIS P1 BASIC

Gene IFNE, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNE-201ENST00000448696 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.51
IFNE-201ENST00000448696 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
IFNE-201ENST00000448696 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
IFNE-201ENST00000448696 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
IFNE-201ENST00000448696 FOXD1Q16676 465 aa19.54■□□□□ 0.72
IFNE-201ENST00000448696 POTEDQ86YR6 584 aa19.12■□□□□ 0.65
IFNE-201ENST00000448696 MSH5O43196 834 aa18.42■□□□□ 0.54
IFNE-201ENST00000448696 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
IFNE-201ENST00000448696 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
IFNE-201ENST00000448696 PPP6R1Q9UPN7 881 aa18.03■□□□□ 0.48
IFNE-201ENST00000448696 ADRA2BP18089 450 aa17.98■□□□□ 0.47
IFNE-201ENST00000448696 MAPK8IP2Q13387 824 aaPredicted RBP16.6■□□□□ 0.25
IFNE-201ENST00000448696 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
IFNE-201ENST00000448696 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
IFNE-201ENST00000448696 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
IFNE-201ENST00000448696 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
IFNE-201ENST00000448696 PPP4R3CPQ6ZMV5 832 aa15.95■□□□□ 0.14
IFNE-201ENST00000448696 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
IFNE-201ENST00000448696 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
IFNE-201ENST00000448696 RNF39Q9H2S5 420 aa15.66■□□□□ 0.1
IFNE-201ENST00000448696 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
IFNE-201ENST00000448696 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
IFNE-201ENST00000448696 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
IFNE-201ENST00000448696 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.04
IFNE-201ENST00000448696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.01
IFNE-201ENST00000448696 NPM3O75607 178 aaKnown RBP15.01□□□□□ -0.01
IFNE-201ENST00000448696 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
IFNE-201ENST00000448696 POTEHQ6S545 545 aa14.7□□□□□ -0.06
IFNE-201ENST00000448696 CAPN15O75808 1086 aa14.64□□□□□ -0.07
IFNE-201ENST00000448696 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
IFNE-201ENST00000448696 DSG3P32926 999 aa14.57□□□□□ -0.08
IFNE-201ENST00000448696 KCNA4P22459 653 aa14.47□□□□□ -0.09
IFNE-201ENST00000448696 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
IFNE-201ENST00000448696 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
IFNE-201ENST00000448696 APLP2Q06481 763 aa14.34□□□□□ -0.11
IFNE-201ENST00000448696 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
IFNE-201ENST00000448696 ABCB7O75027 752 aa14.27□□□□□ -0.12
IFNE-201ENST00000448696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
IFNE-201ENST00000448696 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
IFNE-201ENST00000448696 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
IFNE-201ENST00000448696 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
IFNE-201ENST00000448696 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
IFNE-201ENST00000448696 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
IFNE-201ENST00000448696 POLA2Q14181 598 aa13.87□□□□□ -0.19
IFNE-201ENST00000448696 NISCHQ9Y2I1 1504 aa13.81□□□□□ -0.2
IFNE-201ENST00000448696 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
IFNE-201ENST00000448696 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
IFNE-201ENST00000448696 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
IFNE-201ENST00000448696 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
IFNE-201ENST00000448696 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
IFNE-201ENST00000448696 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
IFNE-201ENST00000448696 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
IFNE-201ENST00000448696 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
IFNE-201ENST00000448696 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
IFNE-201ENST00000448696 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
IFNE-201ENST00000448696 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
IFNE-201ENST00000448696 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
IFNE-201ENST00000448696 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
IFNE-201ENST00000448696 ZBTB22O15209 634 aa13.28□□□□□ -0.28
IFNE-201ENST00000448696 HAX1O00165 279 aa13.23□□□□□ -0.29
IFNE-201ENST00000448696 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.3
IFNE-201ENST00000448696 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.3
IFNE-201ENST00000448696 FBLN2P98095 1184 aa13.14□□□□□ -0.31
IFNE-201ENST00000448696 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
IFNE-201ENST00000448696 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
IFNE-201ENST00000448696 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
IFNE-201ENST00000448696 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
IFNE-201ENST00000448696 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
IFNE-201ENST00000448696 EVX2Q03828 476 aa12.97□□□□□ -0.33
IFNE-201ENST00000448696 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
IFNE-201ENST00000448696 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.34
IFNE-201ENST00000448696 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
IFNE-201ENST00000448696 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
IFNE-201ENST00000448696 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
IFNE-201ENST00000448696 SSUH2Q9Y2M2 353 aa12.88□□□□□ -0.35
IFNE-201ENST00000448696 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
IFNE-201ENST00000448696 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
IFNE-201ENST00000448696 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
IFNE-201ENST00000448696 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
IFNE-201ENST00000448696 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
IFNE-201ENST00000448696 GABBR2O75899 941 aa12.7□□□□□ -0.38
IFNE-201ENST00000448696 LHX8Q68G74 356 aa12.55□□□□□ -0.4
IFNE-201ENST00000448696 CD44P16070 742 aaKnown RBP12.53□□□□□ -0.4
IFNE-201ENST00000448696 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
IFNE-201ENST00000448696 POTEIP0CG38 1075 aa12.4□□□□□ -0.43
IFNE-201ENST00000448696 CLCN6P51797 869 aa12.4□□□□□ -0.43
IFNE-201ENST00000448696 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
IFNE-201ENST00000448696 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
IFNE-201ENST00000448696 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
IFNE-201ENST00000448696 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
IFNE-201ENST00000448696 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
IFNE-201ENST00000448696 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
IFNE-201ENST00000448696 CCDC180Q9P1Z9 1646 aa12.21□□□□□ -0.46
IFNE-201ENST00000448696 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
IFNE-201ENST00000448696 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
IFNE-201ENST00000448696 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
IFNE-201ENST00000448696 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
IFNE-201ENST00000448696 FKBP8Q14318 412 aa12.03□□□□□ -0.48
IFNE-201ENST00000448696 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.48
IFNE-201ENST00000448696 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms