RNA–Protein interactions for RNA: ENST00000525832.2

AP003028.1-203, humanhuman

TSL 3 BASIC

Gene AP003028.1, Length 444 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003028.1-203ENST00000525832 AEBP2Q6ZN18 517 aaPredicted RBP33.2■■■□□ 2.91
AP003028.1-203ENST00000525832 CHIC1Q5VXU3 224 aa31.21■■■□□ 2.59
AP003028.1-203ENST00000525832 SENP3Q9H4L4 574 aaPredicted RBP28.44■■■□□ 2.14
AP003028.1-203ENST00000525832 PHF23Q9BUL5 403 aaPredicted RBP27.99■■■□□ 2.07
AP003028.1-203ENST00000525832 FOXD1Q16676 465 aa26.51■■□□□ 1.83
AP003028.1-203ENST00000525832 MSH5O43196 834 aa25.01■■□□□ 1.59
AP003028.1-203ENST00000525832 POTEDQ86YR6 584 aa25■■□□□ 1.59
AP003028.1-203ENST00000525832 PLPPR3Q6T4P5 718 aa24.78■■□□□ 1.56
AP003028.1-203ENST00000525832 PIAS4Q8N2W9 510 aaPredicted RBP24.67■■□□□ 1.54
AP003028.1-203ENST00000525832 PPP6R1Q9UPN7 881 aa24.48■■□□□ 1.51
AP003028.1-203ENST00000525832 ADRA2BP18089 450 aa24.37■■□□□ 1.49
AP003028.1-203ENST00000525832 MAPK8IP2Q13387 824 aaPredicted RBP22.49■■□□□ 1.19
AP003028.1-203ENST00000525832 DMRT2Q9Y5R5 561 aa22.48■■□□□ 1.19
AP003028.1-203ENST00000525832 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
AP003028.1-203ENST00000525832 CACNB1Q02641 598 aaPredicted RBP21.65■■□□□ 1.06
AP003028.1-203ENST00000525832 PPP4R3CPQ6ZMV5 832 aa21.64■■□□□ 1.05
AP003028.1-203ENST00000525832 HOXD11P31277 338 aaPredicted RBP21.53■■□□□ 1.04
AP003028.1-203ENST00000525832 DCAF8L1A6NGE4 600 aa21.5■■□□□ 1.03
AP003028.1-203ENST00000525832 CNKSR2Q8WXI2 1034 aa21.36■■□□□ 1.01
AP003028.1-203ENST00000525832 RNF39Q9H2S5 420 aa21.29■■□□□ 1
AP003028.1-203ENST00000525832 RNF216Q9NWF9 866 aaPredicted RBP21.26■□□□□ 0.99
AP003028.1-203ENST00000525832 C1QBPQ07021 282 aaKnown RBP20.99■□□□□ 0.95
AP003028.1-203ENST00000525832 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
AP003028.1-203ENST00000525832 NCBP3Q53F19 620 aaKnown RBP20.74■□□□□ 0.91
AP003028.1-203ENST00000525832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.47■□□□□ 0.87
AP003028.1-203ENST00000525832 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
AP003028.1-203ENST00000525832 U3KPZ7 1027 aaPredicted RBP19.99■□□□□ 0.79
AP003028.1-203ENST00000525832 CAPN15O75808 1086 aa19.79■□□□□ 0.76
AP003028.1-203ENST00000525832 DSG3P32926 999 aa19.79■□□□□ 0.76
AP003028.1-203ENST00000525832 SPINK5Q9NQ38 1064 aaPredicted RBP19.79■□□□□ 0.76
AP003028.1-203ENST00000525832 KCNA4P22459 653 aa19.64■□□□□ 0.73
AP003028.1-203ENST00000525832 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
AP003028.1-203ENST00000525832 POTEHQ6S545 545 aa19.53■□□□□ 0.72
AP003028.1-203ENST00000525832 APLP2Q06481 763 aa19.47■□□□□ 0.71
AP003028.1-203ENST00000525832 ZNF219Q9P2Y4 722 aaPredicted RBP19.38■□□□□ 0.69
AP003028.1-203ENST00000525832 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
AP003028.1-203ENST00000525832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.36■□□□□ 0.69
AP003028.1-203ENST00000525832 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
AP003028.1-203ENST00000525832 ABCB7O75027 752 aa19.27■□□□□ 0.68
AP003028.1-203ENST00000525832 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
AP003028.1-203ENST00000525832 RBM42Q9BTD8 480 aaKnown RBP18.94■□□□□ 0.62
AP003028.1-203ENST00000525832 MYCNP04198 464 aaPredicted RBP18.9■□□□□ 0.62
AP003028.1-203ENST00000525832 POLA2Q14181 598 aa18.79■□□□□ 0.6
AP003028.1-203ENST00000525832 CHRDL2Q6WN34 429 aa18.63■□□□□ 0.57
AP003028.1-203ENST00000525832 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
AP003028.1-203ENST00000525832 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
AP003028.1-203ENST00000525832 ZBTB12Q9Y330 459 aaPredicted RBP18.44■□□□□ 0.54
AP003028.1-203ENST00000525832 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
AP003028.1-203ENST00000525832 AKT1S1Q96B36 256 aa18.42■□□□□ 0.54
AP003028.1-203ENST00000525832 REM2Q8IYK8 340 aaPredicted RBP18.21■□□□□ 0.51
AP003028.1-203ENST00000525832 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
AP003028.1-203ENST00000525832 SP7Q8TDD2 431 aaPredicted RBP18.13■□□□□ 0.49
AP003028.1-203ENST00000525832 PIP4P2Q8N4L2 257 aa18.1■□□□□ 0.49
AP003028.1-203ENST00000525832 ZBTB22O15209 634 aa18.03■□□□□ 0.48
AP003028.1-203ENST00000525832 ATXN8OSP0DMR3 200 aa18.01■□□□□ 0.47
AP003028.1-203ENST00000525832 PITPNM1O00562 1244 aa18■□□□□ 0.47
AP003028.1-203ENST00000525832 FXR2P51116 673 aaKnown RBP eCLIP17.96■□□□□ 0.47
AP003028.1-203ENST00000525832 HAX1O00165 279 aa17.87■□□□□ 0.45
AP003028.1-203ENST00000525832 SPDYE2BA6NHP3 402 aa17.83■□□□□ 0.44
AP003028.1-203ENST00000525832 SPDYE6P0CI01 402 aa17.83■□□□□ 0.44
AP003028.1-203ENST00000525832 SPDYE2Q495Y8 402 aa17.83■□□□□ 0.44
AP003028.1-203ENST00000525832 FBLN2P98095 1184 aa17.8■□□□□ 0.44
AP003028.1-203ENST00000525832 SPDYE1Q8NFV5 336 aaPredicted RBP17.6■□□□□ 0.41
AP003028.1-203ENST00000525832 EVX2Q03828 476 aa17.59■□□□□ 0.41
AP003028.1-203ENST00000525832 MKRN4PQ13434 485 aaPredicted RBP17.58■□□□□ 0.4
AP003028.1-203ENST00000525832 PRKAR2AP13861 404 aaKnown RBP17.53■□□□□ 0.4
AP003028.1-203ENST00000525832 CLEC11AQ9Y240 323 aa17.53■□□□□ 0.4
AP003028.1-203ENST00000525832 SSUH2Q9Y2M2 353 aa17.53■□□□□ 0.4
AP003028.1-203ENST00000525832 ZNF692Q9BU19 519 aaPredicted RBP17.51■□□□□ 0.39
AP003028.1-203ENST00000525832 C19orf67A6NJJ6 358 aa17.39■□□□□ 0.37
AP003028.1-203ENST00000525832 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
AP003028.1-203ENST00000525832 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
AP003028.1-203ENST00000525832 GABBR2O75899 941 aa17.21■□□□□ 0.35
AP003028.1-203ENST00000525832 CHADLQ6NUI6 762 aa17.21■□□□□ 0.35
AP003028.1-203ENST00000525832 LHX8Q68G74 356 aa17■□□□□ 0.31
AP003028.1-203ENST00000525832 FARP1Q9Y4F1 1045 aaPredicted RBP16.98■□□□□ 0.31
AP003028.1-203ENST00000525832 CD44P16070 742 aaKnown RBP16.95■□□□□ 0.3
AP003028.1-203ENST00000525832 CLCN6P51797 869 aa16.92■□□□□ 0.3
AP003028.1-203ENST00000525832 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
AP003028.1-203ENST00000525832 POTEIP0CG38 1075 aa16.83■□□□□ 0.28
AP003028.1-203ENST00000525832 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
AP003028.1-203ENST00000525832 ZNF579Q8NAF0 562 aaKnown RBP16.71■□□□□ 0.27
AP003028.1-203ENST00000525832 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
AP003028.1-203ENST00000525832 DCBLD2Q96PD2 775 aa16.67■□□□□ 0.26
AP003028.1-203ENST00000525832 ZRANB1Q9UGI0 708 aa16.65■□□□□ 0.26
AP003028.1-203ENST00000525832 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
AP003028.1-203ENST00000525832 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
AP003028.1-203ENST00000525832 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
AP003028.1-203ENST00000525832 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
AP003028.1-203ENST00000525832 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
AP003028.1-203ENST00000525832 MNX1P50219 401 aaPredicted RBP16.38■□□□□ 0.21
AP003028.1-203ENST00000525832 PHF12Q96QT6 1004 aa16.36■□□□□ 0.21
AP003028.1-203ENST00000525832 OTUD5Q96G74 571 aa16.3■□□□□ 0.2
AP003028.1-203ENST00000525832 POTEB2H3BUK9 544 aa16.26■□□□□ 0.19
AP003028.1-203ENST00000525832 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
AP003028.1-203ENST00000525832 ASTLQ6HA08 431 aaPredicted RBP16.17■□□□□ 0.18
AP003028.1-203ENST00000525832 PROM2Q8N271 834 aa16.16■□□□□ 0.18
AP003028.1-203ENST00000525832 MS4A3Q96HJ5 214 aa16.15■□□□□ 0.18
AP003028.1-203ENST00000525832 PLSCR2Q9NRY7 297 aa16.15■□□□□ 0.18
AP003028.1-203ENST00000525832 ATMINO43313 823 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms