RNA–Protein interactions for RNA: ENST00000615863.1

CCL4-202, Transcript of C-C motif chemokine ligand 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL4, Length 904 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-202ENST00000615863 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
CCL4-202ENST00000615863 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
CCL4-202ENST00000615863 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
CCL4-202ENST00000615863 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
CCL4-202ENST00000615863 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
CCL4-202ENST00000615863 FOXD1Q16676 465 aa17.09■□□□□ 0.33
CCL4-202ENST00000615863 PPP6R1Q9UPN7 881 aa16.63■□□□□ 0.25
CCL4-202ENST00000615863 ADRA2BP18089 450 aa16.6■□□□□ 0.25
CCL4-202ENST00000615863 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
CCL4-202ENST00000615863 MSH5O43196 834 aa15.65■□□□□ 0.1
CCL4-202ENST00000615863 PPP4R3CPQ6ZMV5 832 aa15.5■□□□□ 0.07
CCL4-202ENST00000615863 KCNA4P22459 653 aa15.42■□□□□ 0.06
CCL4-202ENST00000615863 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
CCL4-202ENST00000615863 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
CCL4-202ENST00000615863 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
CCL4-202ENST00000615863 MAPK8IP2Q13387 824 aaPredicted RBP14.99□□□□□ -0.01
CCL4-202ENST00000615863 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
CCL4-202ENST00000615863 DMRT2Q9Y5R5 561 aa14.78□□□□□ -0.04
CCL4-202ENST00000615863 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
CCL4-202ENST00000615863 RNF216Q9NWF9 866 aaPredicted RBP14.68□□□□□ -0.06
CCL4-202ENST00000615863 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
CCL4-202ENST00000615863 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
CCL4-202ENST00000615863 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
CCL4-202ENST00000615863 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.12
CCL4-202ENST00000615863 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
CCL4-202ENST00000615863 ZBTB22O15209 634 aa14.23□□□□□ -0.13
CCL4-202ENST00000615863 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
CCL4-202ENST00000615863 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
CCL4-202ENST00000615863 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
CCL4-202ENST00000615863 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
CCL4-202ENST00000615863 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
CCL4-202ENST00000615863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCL4-202ENST00000615863 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
CCL4-202ENST00000615863 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
CCL4-202ENST00000615863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
CCL4-202ENST00000615863 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
CCL4-202ENST00000615863 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
CCL4-202ENST00000615863 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
CCL4-202ENST00000615863 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
CCL4-202ENST00000615863 APLP2Q06481 763 aa13.34□□□□□ -0.27
CCL4-202ENST00000615863 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
CCL4-202ENST00000615863 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
CCL4-202ENST00000615863 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
CCL4-202ENST00000615863 CAPN15O75808 1086 aa13.09□□□□□ -0.31
CCL4-202ENST00000615863 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
CCL4-202ENST00000615863 POLA2Q14181 598 aa12.96□□□□□ -0.33
CCL4-202ENST00000615863 DSG3P32926 999 aa12.88□□□□□ -0.35
CCL4-202ENST00000615863 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
CCL4-202ENST00000615863 FKBP8Q14318 412 aa12.88□□□□□ -0.35
CCL4-202ENST00000615863 ABCB7O75027 752 aa12.87□□□□□ -0.35
CCL4-202ENST00000615863 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
CCL4-202ENST00000615863 FBLN2P98095 1184 aa12.8□□□□□ -0.36
CCL4-202ENST00000615863 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
CCL4-202ENST00000615863 CCDC180Q9P1Z9 1646 aa12.75□□□□□ -0.37
CCL4-202ENST00000615863 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
CCL4-202ENST00000615863 ABCC9O60706 1549 aa12.59□□□□□ -0.39
CCL4-202ENST00000615863 PROM2Q8N271 834 aa12.58□□□□□ -0.4
CCL4-202ENST00000615863 OSCARQ8IYS5 282 aa12.52□□□□□ -0.41
CCL4-202ENST00000615863 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.41
CCL4-202ENST00000615863 SPDYE6P0CI01 402 aa12.46□□□□□ -0.41
CCL4-202ENST00000615863 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
CCL4-202ENST00000615863 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
CCL4-202ENST00000615863 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
CCL4-202ENST00000615863 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
CCL4-202ENST00000615863 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
CCL4-202ENST00000615863 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
CCL4-202ENST00000615863 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
CCL4-202ENST00000615863 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
CCL4-202ENST00000615863 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
CCL4-202ENST00000615863 RTN4Q9NQC3 1192 aaKnown RBP12.16□□□□□ -0.46
CCL4-202ENST00000615863 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
CCL4-202ENST00000615863 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
CCL4-202ENST00000615863 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.48
CCL4-202ENST00000615863 NACADO15069 1562 aa12.05□□□□□ -0.48
CCL4-202ENST00000615863 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
CCL4-202ENST00000615863 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
CCL4-202ENST00000615863 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
CCL4-202ENST00000615863 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.49
CCL4-202ENST00000615863 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
CCL4-202ENST00000615863 MIER1Q8N108 512 aa11.93□□□□□ -0.5
CCL4-202ENST00000615863 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
CCL4-202ENST00000615863 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
CCL4-202ENST00000615863 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
CCL4-202ENST00000615863 DCAF1Q9Y4B6 1507 aa11.87□□□□□ -0.51
CCL4-202ENST00000615863 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
CCL4-202ENST00000615863 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
CCL4-202ENST00000615863 PRR29P0C7W0 189 aa11.85□□□□□ -0.51
CCL4-202ENST00000615863 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
CCL4-202ENST00000615863 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
CCL4-202ENST00000615863 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
CCL4-202ENST00000615863 PKD2Q13563 968 aa11.78□□□□□ -0.52
CCL4-202ENST00000615863 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
CCL4-202ENST00000615863 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
CCL4-202ENST00000615863 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
CCL4-202ENST00000615863 NUBP1P53384 320 aa11.68□□□□□ -0.54
CCL4-202ENST00000615863 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCL4-202ENST00000615863 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
CCL4-202ENST00000615863 SCRIBQ14160 1630 aa11.62□□□□□ -0.55
CCL4-202ENST00000615863 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
CCL4-202ENST00000615863 SHROOM4Q9ULL8 1493 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms