RNA–Protein interactions for RNA: ENST00000347077.8

ZNF546-201, Transcript of zinc finger protein 546, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF546, Length 7,987 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-201ENST00000347077 PELP1Q8IZL8 1130 aaKnown RBP9.9□□□□□ -0.82
ZNF546-201ENST00000347077 NISCHQ9Y2I1 1504 aa9.74□□□□□ -0.85
ZNF546-201ENST00000347077 DCAF8L2P0C7V8 631 aa9.57□□□□□ -0.88
ZNF546-201ENST00000347077 FAM9AQ8IZU1 332 aaPredicted RBP9.56□□□□□ -0.88
ZNF546-201ENST00000347077 MYT1Q01538 1121 aa9.51□□□□□ -0.89
ZNF546-201ENST00000347077 CCER1Q8TC90 406 aaPredicted RBP9.41□□□□□ -0.9
ZNF546-201ENST00000347077 APLP2Q06481 763 aa9.37□□□□□ -0.91
ZNF546-201ENST00000347077 ZEB1P37275 1124 aaPredicted RBP9.36□□□□□ -0.91
ZNF546-201ENST00000347077 CENPBP07199 599 aaPredicted RBP9.21□□□□□ -0.93
ZNF546-201ENST00000347077 SUPT5HO00267 1087 aaKnown RBP9.16□□□□□ -0.94
ZNF546-201ENST00000347077 YTHDC1Q96MU7 727 aaKnown RBP9.14□□□□□ -0.95
ZNF546-201ENST00000347077 ERICH6Q7L0X2 663 aa9.06□□□□□ -0.96
ZNF546-201ENST00000347077 NEFLP07196 543 aa9□□□□□ -0.97
ZNF546-201ENST00000347077 SHROOM4Q9ULL8 1493 aa8.83□□□□□ -1
ZNF546-201ENST00000347077 TRIM41Q8WV44 630 aa8.81□□□□□ -1
ZNF546-201ENST00000347077 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
ZNF546-201ENST00000347077 TRIM26Q12899 539 aaPredicted RBP8.7□□□□□ -1.02
ZNF546-201ENST00000347077 PCGF6Q9BYE7 350 aa8.69□□□□□ -1.02
ZNF546-201ENST00000347077 UBTFP17480 764 aaKnown RBP8.68□□□□□ -1.02
ZNF546-201ENST00000347077 CLSPNQ9HAW4 1339 aa8.68□□□□□ -1.02
ZNF546-201ENST00000347077 TTBK1Q5TCY1 1321 aaPredicted RBP8.64□□□□□ -1.03
ZNF546-201ENST00000347077 ACIN1Q9UKV3 1341 aaKnown RBP8.6□□□□□ -1.03
ZNF546-201ENST00000347077 MYT1LQ9UL68 1186 aa8.55□□□□□ -1.04
ZNF546-201ENST00000347077 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
ZNF546-201ENST00000347077 NEFMP07197 916 aa8.52□□□□□ -1.04
ZNF546-201ENST00000347077 ATP1B4Q9UN42 357 aaPredicted RBP8.51□□□□□ -1.05
ZNF546-201ENST00000347077 ZNF316A6NFI3 1004 aaPredicted RBP8.49□□□□□ -1.05
ZNF546-201ENST00000347077 CCDC180Q9P1Z9 1646 aa8.46□□□□□ -1.05
ZNF546-201ENST00000347077 HRCP23327 699 aa8.46□□□□□ -1.06
ZNF546-201ENST00000347077 EHMT2Q96KQ7 1210 aa8.43□□□□□ -1.06
ZNF546-201ENST00000347077 ZBTB47Q9UFB7 747 aaPredicted RBP8.43□□□□□ -1.06
ZNF546-201ENST00000347077 EIF5BO60841 1220 aaKnown RBP8.39□□□□□ -1.07
ZNF546-201ENST00000347077 CDK11AQ9UQ88 783 aaPredicted RBP8.34□□□□□ -1.08
ZNF546-201ENST00000347077 ANP32BQ92688 251 aaKnown RBP8.33□□□□□ -1.08
ZNF546-201ENST00000347077 ANP32CO43423 234 aa8.32□□□□□ -1.08
ZNF546-201ENST00000347077 GLIPR1L2Q4G1C9 344 aa8.32□□□□□ -1.08
ZNF546-201ENST00000347077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.31□□□□□ -1.08
ZNF546-201ENST00000347077 HNRNPUL2Q1KMD3 747 aaKnown RBP8.31□□□□□ -1.08
ZNF546-201ENST00000347077 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
ZNF546-201ENST00000347077 ANP32EQ9BTT0 268 aa8.28□□□□□ -1.08
ZNF546-201ENST00000347077 ANP32AP39687 249 aaKnown RBP8.26□□□□□ -1.09
ZNF546-201ENST00000347077 RANGAP1P46060 587 aaPredicted RBP8.26□□□□□ -1.09
ZNF546-201ENST00000347077 CHIC1Q5VXU3 224 aa8.26□□□□□ -1.09
ZNF546-201ENST00000347077 UPF2Q9HAU5 1272 aaKnown RBP8.25□□□□□ -1.09
ZNF546-201ENST00000347077 SLC24A1O60721 1099 aa8.22□□□□□ -1.09
ZNF546-201ENST00000347077 DCAF1Q9Y4B6 1507 aa8.22□□□□□ -1.09
ZNF546-201ENST00000347077 EEA1Q15075 1411 aa8.21□□□□□ -1.09
ZNF546-201ENST00000347077 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.2□□□□□ -1.1
ZNF546-201ENST00000347077 POLR3GLQ9BT43 218 aa8.16□□□□□ -1.1
ZNF546-201ENST00000347077 CANXP27824 592 aaKnown RBP8.16□□□□□ -1.1
ZNF546-201ENST00000347077 SLC4A1APQ9BWU0 796 aaKnown RBP8.15□□□□□ -1.1
ZNF546-201ENST00000347077 FAM50AQ14320 339 aaKnown RBP8.14□□□□□ -1.11
ZNF546-201ENST00000347077 TRIM52Q96A61 297 aa8.14□□□□□ -1.11
ZNF546-201ENST00000347077 ITGAEP38570 1179 aa8.12□□□□□ -1.11
ZNF546-201ENST00000347077 CHMP4BQ9H444 224 aaKnown RBP8.1□□□□□ -1.11
ZNF546-201ENST00000347077 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
ZNF546-201ENST00000347077 TONSLQ96HA7 1378 aa8.09□□□□□ -1.11
ZNF546-201ENST00000347077 RB1CC1Q8TDY2 1594 aa8.08□□□□□ -1.12
ZNF546-201ENST00000347077 NEUROD1Q13562 356 aa8.08□□□□□ -1.12
ZNF546-201ENST00000347077 HSP90AA1P07900 732 aaKnown RBP8.07□□□□□ -1.12
ZNF546-201ENST00000347077 RSF1Q96T23 1441 aaPredicted RBP8.07□□□□□ -1.12
ZNF546-201ENST00000347077 ZCCHC6Q5VYS8 1495 aaKnown RBP8.07□□□□□ -1.12
ZNF546-201ENST00000347077 NACADO15069 1562 aa8.07□□□□□ -1.12
ZNF546-201ENST00000347077 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
ZNF546-201ENST00000347077 ARID4BQ4LE39 1312 aaPredicted RBP8.06□□□□□ -1.12
ZNF546-201ENST00000347077 CSRNP3Q8WYN3 585 aa8.06□□□□□ -1.12
ZNF546-201ENST00000347077 CDCA8Q53HL2 280 aa8.06□□□□□ -1.12
ZNF546-201ENST00000347077 ESF1Q9H501 851 aaKnown RBP8.05□□□□□ -1.12
ZNF546-201ENST00000347077 BECN1Q14457 450 aa8.04□□□□□ -1.12
ZNF546-201ENST00000347077 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
ZNF546-201ENST00000347077 CDK11BP21127 795 aaKnown RBP8.02□□□□□ -1.12
ZNF546-201ENST00000347077 MYH16Q9H6N6 1097 aa8.02□□□□□ -1.13
ZNF546-201ENST00000347077 GOLGA6L22H0YM25 854 aa8.02□□□□□ -1.13
ZNF546-201ENST00000347077 MS4A1P11836 297 aa8□□□□□ -1.13
ZNF546-201ENST00000347077 TRIM44Q96DX7 344 aaPredicted RBP8□□□□□ -1.13
ZNF546-201ENST00000347077 NPM1P06748 294 aaKnown RBP eCLIP7.99□□□□□ -1.13
ZNF546-201ENST00000347077 TIMELESSQ9UNS1 1208 aa7.98□□□□□ -1.13
ZNF546-201ENST00000347077 HAP1P54257 671 aaPredicted RBP7.98□□□□□ -1.13
ZNF546-201ENST00000347077 CHMP4AQ9BY43 222 aa7.98□□□□□ -1.13
ZNF546-201ENST00000347077 NCLP19338 710 aaKnown RBP7.97□□□□□ -1.13
ZNF546-201ENST00000347077 PNNQ9H307 717 aaKnown RBP7.97□□□□□ -1.13
ZNF546-201ENST00000347077 GTF3C3Q9Y5Q9 886 aa7.97□□□□□ -1.13
ZNF546-201ENST00000347077 PTMSP20962 102 aa7.97□□□□□ -1.13
ZNF546-201ENST00000347077 L1TD1Q5T7N2 865 aaKnown RBP7.96□□□□□ -1.13
ZNF546-201ENST00000347077 NRDCO43847 1150 aa7.96□□□□□ -1.13
ZNF546-201ENST00000347077 LOC105371045A0A1W2PR82 267 aa7.96□□□□□ -1.14
ZNF546-201ENST00000347077 ABCC9O60706 1549 aa7.96□□□□□ -1.14
ZNF546-201ENST00000347077 CASC1Q6TDU7 716 aa7.95□□□□□ -1.14
ZNF546-201ENST00000347077 TSPY4P0CV99 314 aa7.95□□□□□ -1.14
ZNF546-201ENST00000347077 TSPY10P0CW01 314 aa7.95□□□□□ -1.14
ZNF546-201ENST00000347077 WDR43Q15061 677 aaKnown RBP eCLIP7.94□□□□□ -1.14
ZNF546-201ENST00000347077 ERICH6BQ5W0A0 696 aa7.94□□□□□ -1.14
ZNF546-201ENST00000347077 TMC1Q8TDI8 760 aa7.94□□□□□ -1.14
ZNF546-201ENST00000347077 GOLGA3Q08378 1498 aa7.94□□□□□ -1.14
ZNF546-201ENST00000347077 FHAD1B1AJZ9 1412 aa7.93□□□□□ -1.14
ZNF546-201ENST00000347077 PPM1GO15355 546 aaPredicted RBP7.92□□□□□ -1.14
ZNF546-201ENST00000347077 GOLGA6L6A8MZA4 724 aa7.92□□□□□ -1.14
ZNF546-201ENST00000347077 USP35Q9P2H5 1018 aa7.92□□□□□ -1.14
ZNF546-201ENST00000347077 SCRIBQ14160 1630 aa7.92□□□□□ -1.14
ZNF546-201ENST00000347077 CCDC136Q96JN2 1154 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms