RNA–Protein interactions for RNA: ENST00000587402.2

PIK3C3-207, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3 BASIC

Gene PIK3C3, Length 452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-207ENST00000587402 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
PIK3C3-207ENST00000587402 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
PIK3C3-207ENST00000587402 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.09
PIK3C3-207ENST00000587402 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
PIK3C3-207ENST00000587402 FOXD1Q16676 465 aa20.35■□□□□ 0.85
PIK3C3-207ENST00000587402 PLPPR3Q6T4P5 718 aa19.91■□□□□ 0.78
PIK3C3-207ENST00000587402 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
PIK3C3-207ENST00000587402 ADRA2BP18089 450 aa19.17■□□□□ 0.66
PIK3C3-207ENST00000587402 MSH5O43196 834 aa19.05■□□□□ 0.64
PIK3C3-207ENST00000587402 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
PIK3C3-207ENST00000587402 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
PIK3C3-207ENST00000587402 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
PIK3C3-207ENST00000587402 PPP4R3CPQ6ZMV5 832 aa17.49■□□□□ 0.39
PIK3C3-207ENST00000587402 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
PIK3C3-207ENST00000587402 DMRT2Q9Y5R5 561 aa17.39■□□□□ 0.37
PIK3C3-207ENST00000587402 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
PIK3C3-207ENST00000587402 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
PIK3C3-207ENST00000587402 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
PIK3C3-207ENST00000587402 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
PIK3C3-207ENST00000587402 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
PIK3C3-207ENST00000587402 KCNA4P22459 653 aa16.72■□□□□ 0.27
PIK3C3-207ENST00000587402 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
PIK3C3-207ENST00000587402 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
PIK3C3-207ENST00000587402 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
PIK3C3-207ENST00000587402 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
PIK3C3-207ENST00000587402 NISCHQ9Y2I1 1504 aa16.21■□□□□ 0.19
PIK3C3-207ENST00000587402 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
PIK3C3-207ENST00000587402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
PIK3C3-207ENST00000587402 ABCC9O60706 1549 aa15.95■□□□□ 0.14
PIK3C3-207ENST00000587402 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
PIK3C3-207ENST00000587402 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
PIK3C3-207ENST00000587402 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
PIK3C3-207ENST00000587402 FOXD4L1Q9NU39 408 aa15.5■□□□□ 0.07
PIK3C3-207ENST00000587402 MYCNP04198 464 aaPredicted RBP15.45■□□□□ 0.06
PIK3C3-207ENST00000587402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
PIK3C3-207ENST00000587402 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
PIK3C3-207ENST00000587402 ZBTB22O15209 634 aa15.43■□□□□ 0.06
PIK3C3-207ENST00000587402 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
PIK3C3-207ENST00000587402 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
PIK3C3-207ENST00000587402 APLP2Q06481 763 aa15.34■□□□□ 0.05
PIK3C3-207ENST00000587402 CAPN15O75808 1086 aa15.29■□□□□ 0.04
PIK3C3-207ENST00000587402 DSG3P32926 999 aa15.22■□□□□ 0.03
PIK3C3-207ENST00000587402 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
PIK3C3-207ENST00000587402 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
PIK3C3-207ENST00000587402 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
PIK3C3-207ENST00000587402 ATF5Q9Y2D1 282 aaPredicted RBP15.05■□□□□ -0
PIK3C3-207ENST00000587402 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
PIK3C3-207ENST00000587402 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
PIK3C3-207ENST00000587402 CCDC180Q9P1Z9 1646 aa15.01□□□□□ -0.01
PIK3C3-207ENST00000587402 ABCB7O75027 752 aa14.98□□□□□ -0.01
PIK3C3-207ENST00000587402 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
PIK3C3-207ENST00000587402 POLA2Q14181 598 aa14.85□□□□□ -0.03
PIK3C3-207ENST00000587402 RB1CC1Q8TDY2 1594 aa14.72□□□□□ -0.05
PIK3C3-207ENST00000587402 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
PIK3C3-207ENST00000587402 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
PIK3C3-207ENST00000587402 POTEHQ6S545 545 aa14.56□□□□□ -0.08
PIK3C3-207ENST00000587402 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
PIK3C3-207ENST00000587402 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
PIK3C3-207ENST00000587402 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
PIK3C3-207ENST00000587402 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
PIK3C3-207ENST00000587402 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
PIK3C3-207ENST00000587402 FBLN2P98095 1184 aa14.39□□□□□ -0.11
PIK3C3-207ENST00000587402 CC2D2AQ9P2K1 1620 aa14.37□□□□□ -0.11
PIK3C3-207ENST00000587402 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
PIK3C3-207ENST00000587402 NACADO15069 1562 aa14.34□□□□□ -0.11
PIK3C3-207ENST00000587402 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
PIK3C3-207ENST00000587402 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
PIK3C3-207ENST00000587402 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
PIK3C3-207ENST00000587402 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
PIK3C3-207ENST00000587402 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
PIK3C3-207ENST00000587402 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
PIK3C3-207ENST00000587402 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
PIK3C3-207ENST00000587402 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
PIK3C3-207ENST00000587402 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
PIK3C3-207ENST00000587402 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
PIK3C3-207ENST00000587402 CUX2O14529 1486 aa14.06□□□□□ -0.16
PIK3C3-207ENST00000587402 ZNF692Q9BU19 519 aaPredicted RBP14.03□□□□□ -0.16
PIK3C3-207ENST00000587402 SHROOM4Q9ULL8 1493 aa13.95□□□□□ -0.18
PIK3C3-207ENST00000587402 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
PIK3C3-207ENST00000587402 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
PIK3C3-207ENST00000587402 PIP4P2Q8N4L2 257 aa13.86□□□□□ -0.19
PIK3C3-207ENST00000587402 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
PIK3C3-207ENST00000587402 ERCC6Q03468 1493 aa13.81□□□□□ -0.2
PIK3C3-207ENST00000587402 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
PIK3C3-207ENST00000587402 MYO15BQ96JP2 1530 aa13.77□□□□□ -0.21
PIK3C3-207ENST00000587402 PROM2Q8N271 834 aa13.74□□□□□ -0.21
PIK3C3-207ENST00000587402 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
PIK3C3-207ENST00000587402 SCRIBQ14160 1630 aa13.69□□□□□ -0.22
PIK3C3-207ENST00000587402 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
PIK3C3-207ENST00000587402 HAX1O00165 279 aa13.59□□□□□ -0.23
PIK3C3-207ENST00000587402 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
PIK3C3-207ENST00000587402 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
PIK3C3-207ENST00000587402 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
PIK3C3-207ENST00000587402 FKBP8Q14318 412 aa13.54□□□□□ -0.24
PIK3C3-207ENST00000587402 THOC2Q8NI27 1593 aaKnown RBP13.53□□□□□ -0.24
PIK3C3-207ENST00000587402 CHADLQ6NUI6 762 aa13.46□□□□□ -0.25
PIK3C3-207ENST00000587402 NESP48681 1621 aa13.46□□□□□ -0.26
PIK3C3-207ENST00000587402 EVX2Q03828 476 aa13.43□□□□□ -0.26
PIK3C3-207ENST00000587402 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
PIK3C3-207ENST00000587402 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms