RNA–Protein interactions for RNA: ENST00000556602.1

AL355834.1-201, humanhuman

BASIC

Gene AL355834.1, Length 3,965 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355834.1-201ENST00000556602 CHIC1Q5VXU3 224 aa11.4□□□□□ -0.59
AL355834.1-201ENST00000556602 NISCHQ9Y2I1 1504 aa11.35□□□□□ -0.59
AL355834.1-201ENST00000556602 AEBP2Q6ZN18 517 aaPredicted RBP11.29□□□□□ -0.6
AL355834.1-201ENST00000556602 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
AL355834.1-201ENST00000556602 PHF23Q9BUL5 403 aaPredicted RBP10.39□□□□□ -0.75
AL355834.1-201ENST00000556602 MYT1Q01538 1121 aa10.26□□□□□ -0.77
AL355834.1-201ENST00000556602 HRCP23327 699 aa10.23□□□□□ -0.77
AL355834.1-201ENST00000556602 EHMT2Q96KQ7 1210 aa10.21□□□□□ -0.78
AL355834.1-201ENST00000556602 TTBK1Q5TCY1 1321 aaPredicted RBP10.05□□□□□ -0.8
AL355834.1-201ENST00000556602 MYO15BQ96JP2 1530 aa10.03□□□□□ -0.8
AL355834.1-201ENST00000556602 DCAF1Q9Y4B6 1507 aa9.93□□□□□ -0.82
AL355834.1-201ENST00000556602 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
AL355834.1-201ENST00000556602 CCDC180Q9P1Z9 1646 aa9.86□□□□□ -0.83
AL355834.1-201ENST00000556602 APLP2Q06481 763 aa9.82□□□□□ -0.84
AL355834.1-201ENST00000556602 PPARGC1BQ86YN6 1023 aaKnown RBP9.78□□□□□ -0.84
AL355834.1-201ENST00000556602 ZCCHC6Q5VYS8 1495 aaKnown RBP9.76□□□□□ -0.85
AL355834.1-201ENST00000556602 SCAF1Q9H7N4 1312 aaKnown RBP9.69□□□□□ -0.86
AL355834.1-201ENST00000556602 PCGF6Q9BYE7 350 aa9.69□□□□□ -0.86
AL355834.1-201ENST00000556602 KCNA4P22459 653 aa9.61□□□□□ -0.87
AL355834.1-201ENST00000556602 PLPPR3Q6T4P5 718 aa9.56□□□□□ -0.88
AL355834.1-201ENST00000556602 TRIM26Q12899 539 aaPredicted RBP9.56□□□□□ -0.88
AL355834.1-201ENST00000556602 SHROOM4Q9ULL8 1493 aa9.55□□□□□ -0.88
AL355834.1-201ENST00000556602 ZEB1P37275 1124 aaPredicted RBP9.54□□□□□ -0.88
AL355834.1-201ENST00000556602 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
AL355834.1-201ENST00000556602 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
AL355834.1-201ENST00000556602 DCAF8L2P0C7V8 631 aa9.49□□□□□ -0.89
AL355834.1-201ENST00000556602 BCL11AQ9H165 835 aa9.49□□□□□ -0.89
AL355834.1-201ENST00000556602 ADRA2BP18089 450 aa9.48□□□□□ -0.89
AL355834.1-201ENST00000556602 FAM9AQ8IZU1 332 aaPredicted RBP9.46□□□□□ -0.89
AL355834.1-201ENST00000556602 ERICH6Q7L0X2 663 aa9.42□□□□□ -0.9
AL355834.1-201ENST00000556602 ACIN1Q9UKV3 1341 aaKnown RBP9.4□□□□□ -0.9
AL355834.1-201ENST00000556602 CSRNP3Q8WYN3 585 aa9.36□□□□□ -0.91
AL355834.1-201ENST00000556602 LOC105371045A0A1W2PR82 267 aa9.34□□□□□ -0.91
AL355834.1-201ENST00000556602 NEUROD1Q13562 356 aa9.33□□□□□ -0.92
AL355834.1-201ENST00000556602 ABCC9O60706 1549 aa9.31□□□□□ -0.92
AL355834.1-201ENST00000556602 RTN4Q9NQC3 1192 aaKnown RBP9.25□□□□□ -0.93
AL355834.1-201ENST00000556602 DAXXQ9UER7 740 aaPredicted RBP9.24□□□□□ -0.93
AL355834.1-201ENST00000556602 GTF3C3Q9Y5Q9 886 aa9.21□□□□□ -0.94
AL355834.1-201ENST00000556602 TRIM41Q8WV44 630 aa9.18□□□□□ -0.94
AL355834.1-201ENST00000556602 RB1CC1Q8TDY2 1594 aa9.15□□□□□ -0.95
AL355834.1-201ENST00000556602 EIF4G1Q04637 1599 aaKnown RBP9.14□□□□□ -0.95
AL355834.1-201ENST00000556602 WRNQ14191 1432 aaPredicted RBP eCLIP9.13□□□□□ -0.95
AL355834.1-201ENST00000556602 CENPBP07199 599 aaPredicted RBP9.12□□□□□ -0.95
AL355834.1-201ENST00000556602 PPP6R1Q9UPN7 881 aa9.11□□□□□ -0.95
AL355834.1-201ENST00000556602 RSF1Q96T23 1441 aaPredicted RBP9.1□□□□□ -0.95
AL355834.1-201ENST00000556602 SLC4A1APQ9BWU0 796 aaKnown RBP9.1□□□□□ -0.95
AL355834.1-201ENST00000556602 DIEXFQ68CQ4 756 aaKnown RBP9.08□□□□□ -0.96
AL355834.1-201ENST00000556602 SENP3Q9H4L4 574 aaPredicted RBP9.04□□□□□ -0.96
AL355834.1-201ENST00000556602 CLSPNQ9HAW4 1339 aa9.01□□□□□ -0.97
AL355834.1-201ENST00000556602 ANP32EQ9BTT0 268 aa8.97□□□□□ -0.97
AL355834.1-201ENST00000556602 ZNF316A6NFI3 1004 aaPredicted RBP8.95□□□□□ -0.98
AL355834.1-201ENST00000556602 UBE2Q2Q8WVN8 375 aa8.94□□□□□ -0.98
AL355834.1-201ENST00000556602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.94□□□□□ -0.98
AL355834.1-201ENST00000556602 ZBTB22O15209 634 aa8.9□□□□□ -0.98
AL355834.1-201ENST00000556602 CCER1Q8TC90 406 aaPredicted RBP8.88□□□□□ -0.99
AL355834.1-201ENST00000556602 BAZ1AQ9NRL2 1556 aaPredicted RBP8.87□□□□□ -0.99
AL355834.1-201ENST00000556602 TSHZ2Q9NRE2 1034 aa8.87□□□□□ -0.99
AL355834.1-201ENST00000556602 MIER1Q8N108 512 aa8.87□□□□□ -0.99
AL355834.1-201ENST00000556602 EIF5BO60841 1220 aaKnown RBP8.86□□□□□ -0.99
AL355834.1-201ENST00000556602 SUPT16HQ9Y5B9 1047 aaKnown RBP8.86□□□□□ -0.99
AL355834.1-201ENST00000556602 NACADO15069 1562 aa8.85□□□□□ -0.99
AL355834.1-201ENST00000556602 TNIKQ9UKE5 1360 aa8.83□□□□□ -1
AL355834.1-201ENST00000556602 CEP162Q5TB80 1403 aa8.82□□□□□ -1
AL355834.1-201ENST00000556602 MROH2BQ7Z745 1585 aa8.81□□□□□ -1
AL355834.1-201ENST00000556602 WIZO95785 1651 aa8.79□□□□□ -1
AL355834.1-201ENST00000556602 SCRIBQ14160 1630 aa8.78□□□□□ -1
AL355834.1-201ENST00000556602 PLEKHG5O94827 1062 aa8.78□□□□□ -1
AL355834.1-201ENST00000556602 EEA1Q15075 1411 aa8.77□□□□□ -1.01
AL355834.1-201ENST00000556602 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
AL355834.1-201ENST00000556602 CUX2O14529 1486 aa8.75□□□□□ -1.01
AL355834.1-201ENST00000556602 KIF21BO75037 1637 aa8.75□□□□□ -1.01
AL355834.1-201ENST00000556602 CECR2Q9BXF3 1484 aa8.73□□□□□ -1.01
AL355834.1-201ENST00000556602 CCDC88BA6NC98 1476 aa8.73□□□□□ -1.01
AL355834.1-201ENST00000556602 ABCC8Q09428 1581 aa8.72□□□□□ -1.01
AL355834.1-201ENST00000556602 AMER1Q5JTC6 1135 aaPredicted RBP8.71□□□□□ -1.02
AL355834.1-201ENST00000556602 TOP2AP11388 1531 aaKnown RBP8.7□□□□□ -1.02
AL355834.1-201ENST00000556602 SMARCA2P51531 1590 aa8.68□□□□□ -1.02
AL355834.1-201ENST00000556602 PPP4R3CPQ6ZMV5 832 aa8.67□□□□□ -1.02
AL355834.1-201ENST00000556602 NPM3O75607 178 aaKnown RBP8.66□□□□□ -1.02
AL355834.1-201ENST00000556602 YTHDC1Q96MU7 727 aaKnown RBP8.66□□□□□ -1.02
AL355834.1-201ENST00000556602 GOLGA3Q08378 1498 aa8.66□□□□□ -1.02
AL355834.1-201ENST00000556602 DHX57Q6P158 1386 aaKnown RBP8.66□□□□□ -1.02
AL355834.1-201ENST00000556602 SOGA1O94964 1423 aa8.65□□□□□ -1.02
AL355834.1-201ENST00000556602 BAZ1BQ9UIG0 1483 aaKnown RBP8.65□□□□□ -1.03
AL355834.1-201ENST00000556602 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
AL355834.1-201ENST00000556602 RUSC2Q8N2Y8 1516 aa8.62□□□□□ -1.03
AL355834.1-201ENST00000556602 MSH5O43196 834 aa8.62□□□□□ -1.03
AL355834.1-201ENST00000556602 CLIP1P30622 1438 aa8.61□□□□□ -1.03
AL355834.1-201ENST00000556602 FOXD1Q16676 465 aa8.61□□□□□ -1.03
AL355834.1-201ENST00000556602 FANCIQ9NVI1 1328 aa8.61□□□□□ -1.03
AL355834.1-201ENST00000556602 RBM19Q9Y4C8 960 aaKnown RBP8.6□□□□□ -1.03
AL355834.1-201ENST00000556602 RRBP1Q9P2E9 1410 aaKnown RBP8.59□□□□□ -1.03
AL355834.1-201ENST00000556602 CEP164Q9UPV0 1460 aa8.58□□□□□ -1.04
AL355834.1-201ENST00000556602 MAPKBP1O60336 1514 aa8.58□□□□□ -1.04
AL355834.1-201ENST00000556602 SMARCA4P51532 1647 aa8.57□□□□□ -1.04
AL355834.1-201ENST00000556602 SYNJ1O43426 1573 aa8.57□□□□□ -1.04
AL355834.1-201ENST00000556602 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
AL355834.1-201ENST00000556602 PKNOX2Q96KN3 472 aa8.55□□□□□ -1.04
AL355834.1-201ENST00000556602 PEG3Q9GZU2 1588 aa8.55□□□□□ -1.04
AL355834.1-201ENST00000556602 ERICH6BQ5W0A0 696 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms