RNA–Protein interactions for RNA: ENST00000415193.5

LINC01047-201, Transcript of long intergenic non-protein coding RNA 1047, humanhuman

TSL 5 BASIC

Gene LINC01047, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01047-201ENST00000415193 AEBP2Q6ZN18 517 aaPredicted RBP27.4■■□□□ 1.98
LINC01047-201ENST00000415193 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
LINC01047-201ENST00000415193 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
LINC01047-201ENST00000415193 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
LINC01047-201ENST00000415193 POTEDQ86YR6 584 aa22.22■■□□□ 1.15
LINC01047-201ENST00000415193 FOXD1Q16676 465 aa22.07■■□□□ 1.12
LINC01047-201ENST00000415193 MSH5O43196 834 aa21.11■□□□□ 0.97
LINC01047-201ENST00000415193 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
LINC01047-201ENST00000415193 PLPPR3Q6T4P5 718 aa20.2■□□□□ 0.82
LINC01047-201ENST00000415193 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
LINC01047-201ENST00000415193 ADRA2BP18089 450 aa19.72■□□□□ 0.75
LINC01047-201ENST00000415193 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
LINC01047-201ENST00000415193 KCNA4P22459 653 aa19.06■□□□□ 0.64
LINC01047-201ENST00000415193 CACNB1Q02641 598 aaPredicted RBP18.68■□□□□ 0.58
LINC01047-201ENST00000415193 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
LINC01047-201ENST00000415193 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
LINC01047-201ENST00000415193 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
LINC01047-201ENST00000415193 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
LINC01047-201ENST00000415193 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
LINC01047-201ENST00000415193 SLC24A1O60721 1099 aa18.08■□□□□ 0.48
LINC01047-201ENST00000415193 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
LINC01047-201ENST00000415193 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
LINC01047-201ENST00000415193 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
LINC01047-201ENST00000415193 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
LINC01047-201ENST00000415193 C1QBPQ07021 282 aaKnown RBP17.62■□□□□ 0.41
LINC01047-201ENST00000415193 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
LINC01047-201ENST00000415193 AMER1Q5JTC6 1135 aaPredicted RBP17.59■□□□□ 0.41
LINC01047-201ENST00000415193 RTN4Q9NQC3 1192 aaKnown RBP17.58■□□□□ 0.4
LINC01047-201ENST00000415193 ZBTB22O15209 634 aa17.57■□□□□ 0.4
LINC01047-201ENST00000415193 HOXD11P31277 338 aaPredicted RBP17.51■□□□□ 0.39
LINC01047-201ENST00000415193 POTEHQ6S545 545 aa17.23■□□□□ 0.35
LINC01047-201ENST00000415193 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
LINC01047-201ENST00000415193 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
LINC01047-201ENST00000415193 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
LINC01047-201ENST00000415193 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
LINC01047-201ENST00000415193 FKBP8Q14318 412 aa16.69■□□□□ 0.26
LINC01047-201ENST00000415193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC01047-201ENST00000415193 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
LINC01047-201ENST00000415193 DSG3P32926 999 aa16.41■□□□□ 0.22
LINC01047-201ENST00000415193 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
LINC01047-201ENST00000415193 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
LINC01047-201ENST00000415193 CAPN15O75808 1086 aa16.24■□□□□ 0.19
LINC01047-201ENST00000415193 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
LINC01047-201ENST00000415193 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
LINC01047-201ENST00000415193 PLCB2Q00722 1185 aa16.15■□□□□ 0.18
LINC01047-201ENST00000415193 BCANQ96GW7 911 aa15.98■□□□□ 0.15
LINC01047-201ENST00000415193 HAP1P54257 671 aaPredicted RBP15.89■□□□□ 0.13
LINC01047-201ENST00000415193 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
LINC01047-201ENST00000415193 TAOK2Q9UL54 1235 aa15.82■□□□□ 0.12
LINC01047-201ENST00000415193 FBXO3Q9UK99 471 aa15.75■□□□□ 0.11
LINC01047-201ENST00000415193 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
LINC01047-201ENST00000415193 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
LINC01047-201ENST00000415193 ABCB7O75027 752 aa15.73■□□□□ 0.11
LINC01047-201ENST00000415193 CHRDL2Q6WN34 429 aa15.73■□□□□ 0.11
LINC01047-201ENST00000415193 VSIG10Q8N0Z9 540 aa15.73■□□□□ 0.11
LINC01047-201ENST00000415193 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
LINC01047-201ENST00000415193 APLP2Q06481 763 aa15.72■□□□□ 0.11
LINC01047-201ENST00000415193 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
LINC01047-201ENST00000415193 SP7Q8TDD2 431 aaPredicted RBP15.69■□□□□ 0.1
LINC01047-201ENST00000415193 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
LINC01047-201ENST00000415193 TPRNQ4KMQ1 711 aa15.55■□□□□ 0.08
LINC01047-201ENST00000415193 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
LINC01047-201ENST00000415193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
LINC01047-201ENST00000415193 VASPP50552 380 aaPredicted RBP15.5■□□□□ 0.07
LINC01047-201ENST00000415193 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
LINC01047-201ENST00000415193 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
LINC01047-201ENST00000415193 PROM2Q8N271 834 aa15.39■□□□□ 0.05
LINC01047-201ENST00000415193 PKD2Q13563 968 aa15.38■□□□□ 0.05
LINC01047-201ENST00000415193 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
LINC01047-201ENST00000415193 IFNLR1Q8IU57 520 aaPredicted RBP15.37■□□□□ 0.05
LINC01047-201ENST00000415193 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
LINC01047-201ENST00000415193 BBXQ8WY36 941 aaPredicted RBP15.3■□□□□ 0.04
LINC01047-201ENST00000415193 FBLN2P98095 1184 aa15.27■□□□□ 0.04
LINC01047-201ENST00000415193 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
LINC01047-201ENST00000415193 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
LINC01047-201ENST00000415193 CFAP44Q96MT7 982 aa15.14■□□□□ 0.01
LINC01047-201ENST00000415193 HAX1O00165 279 aa15.13■□□□□ 0.01
LINC01047-201ENST00000415193 PIP4P2Q8N4L2 257 aa15.13■□□□□ 0.01
LINC01047-201ENST00000415193 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
LINC01047-201ENST00000415193 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
LINC01047-201ENST00000415193 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
LINC01047-201ENST00000415193 POLA2Q14181 598 aa15.1■□□□□ 0.01
LINC01047-201ENST00000415193 ECM2O94769 699 aaPredicted RBP15.05■□□□□ -0
LINC01047-201ENST00000415193 TULP1O00294 542 aaPredicted RBP15.03■□□□□ -0
LINC01047-201ENST00000415193 DAXXQ9UER7 740 aaPredicted RBP15.03■□□□□ -0
LINC01047-201ENST00000415193 SPRYD3Q8NCJ5 442 aa15.02■□□□□ -0
LINC01047-201ENST00000415193 ARXQ96QS3 562 aa15.01□□□□□ -0.01
LINC01047-201ENST00000415193 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
LINC01047-201ENST00000415193 SPOCK2Q92563 424 aa14.98□□□□□ -0.01
LINC01047-201ENST00000415193 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
LINC01047-201ENST00000415193 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
LINC01047-201ENST00000415193 NBR1Q14596 966 aa14.94□□□□□ -0.02
LINC01047-201ENST00000415193 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC01047-201ENST00000415193 GTF3C3Q9Y5Q9 886 aa14.92□□□□□ -0.02
LINC01047-201ENST00000415193 KLHL34Q8N239 644 aa14.89□□□□□ -0.03
LINC01047-201ENST00000415193 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
LINC01047-201ENST00000415193 RGL2O15211 777 aa14.85□□□□□ -0.03
LINC01047-201ENST00000415193 EVX2Q03828 476 aa14.82□□□□□ -0.04
LINC01047-201ENST00000415193 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
LINC01047-201ENST00000415193 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms