Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNA5SP401-201ENST00000515920 127 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 IGLC5-201ENST00000519670 293 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 RAN-211ENST00000541679 572 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 NPIPP1-203ENST00000547107 1071 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC006270.2-201ENST00000578523 652 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 EIF5AP3-201ENST00000589460 462 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AP004247.3-201ENST00000608682 624 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 TTR-205ENST00000613781 556 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC087588.2-201ENST00000617667 426 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 DHRS9-206ENST00000436483 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
USB1Q9BQ65 AC128688.2-201ENST00000563632 1937 ntBASIC7.7□□□□□ -1.18
USB1Q9BQ65 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USB1Q9BQ65 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 CASC19-205ENST00000641013 1411 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 LINC01588-217ENST00000635379 1595 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 Y_RNA.445-201ENST00000384168 102 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 RNU6-784P-201ENST00000384330 106 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 MIR30C1-201ENST00000385227 89 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 RPS4XP8-201ENST00000402039 771 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 RPL35AP24-201ENST00000413846 330 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC113618.1-201ENST00000416747 285 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC009161.1-201ENST00000417306 376 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 MTATP6P18-201ENST00000417994 673 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL645937.1-202ENST00000421799 937 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 RPL36P2-201ENST00000426026 315 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL158073.1-201ENST00000426848 1104 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL606489.2-201ENST00000433886 234 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 SDHDP2-201ENST00000436937 465 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL355149.1-201ENST00000438396 882 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 SAP18P3-201ENST00000449663 396 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 ST13P21-201ENST00000453250 1098 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL583843.1-201ENST00000456070 346 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL133480.2-201ENST00000456723 487 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 BTF3P5-201ENST00000457252 467 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 PSMC1P13-201ENST00000458195 985 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 RPS27AP17-201ENST00000463344 455 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 RN7SL687P-201ENST00000480496 285 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 NMNAT1P4-201ENST00000505598 840 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms