RNA–Protein interactions for RNA: ENST00000514558.5

TMEM144-216, Transcript of transmembrane protein 144, humanhuman

TSL 1 (best) BASIC

Gene TMEM144, Length 3,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM144-216ENST00000514558 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
TMEM144-216ENST00000514558 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
TMEM144-216ENST00000514558 DCAF1Q9Y4B6 1507 aa15.28■□□□□ 0.04
TMEM144-216ENST00000514558 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
TMEM144-216ENST00000514558 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
TMEM144-216ENST00000514558 SUPT5HO00267 1087 aaKnown RBP15.05■□□□□ -0
TMEM144-216ENST00000514558 ZCCHC6Q5VYS8 1495 aaKnown RBP14.96□□□□□ -0.02
TMEM144-216ENST00000514558 UNC13AQ9UPW8 1703 aa14.91□□□□□ -0.02
TMEM144-216ENST00000514558 DCAF8L2P0C7V8 631 aa14.8□□□□□ -0.04
TMEM144-216ENST00000514558 CHIC1Q5VXU3 224 aa14.52□□□□□ -0.09
TMEM144-216ENST00000514558 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
TMEM144-216ENST00000514558 HRCP23327 699 aa14.38□□□□□ -0.11
TMEM144-216ENST00000514558 NACADO15069 1562 aa14.37□□□□□ -0.11
TMEM144-216ENST00000514558 BICRAQ9NZM4 1560 aa14.33□□□□□ -0.12
TMEM144-216ENST00000514558 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
TMEM144-216ENST00000514558 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
TMEM144-216ENST00000514558 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
TMEM144-216ENST00000514558 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
TMEM144-216ENST00000514558 ABCC9O60706 1549 aa14.1□□□□□ -0.15
TMEM144-216ENST00000514558 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
TMEM144-216ENST00000514558 FAM9AQ8IZU1 332 aaPredicted RBP13.96□□□□□ -0.18
TMEM144-216ENST00000514558 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
TMEM144-216ENST00000514558 RB1CC1Q8TDY2 1594 aa13.94□□□□□ -0.18
TMEM144-216ENST00000514558 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
TMEM144-216ENST00000514558 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
TMEM144-216ENST00000514558 PRDM2Q13029 1718 aa13.88□□□□□ -0.19
TMEM144-216ENST00000514558 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
TMEM144-216ENST00000514558 ZEB1P37275 1124 aaPredicted RBP13.78□□□□□ -0.2
TMEM144-216ENST00000514558 BAZ1AQ9NRL2 1556 aaPredicted RBP13.63□□□□□ -0.23
TMEM144-216ENST00000514558 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
TMEM144-216ENST00000514558 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
TMEM144-216ENST00000514558 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
TMEM144-216ENST00000514558 TTBK1Q5TCY1 1321 aaPredicted RBP13.52□□□□□ -0.24
TMEM144-216ENST00000514558 MROH2BQ7Z745 1585 aa13.52□□□□□ -0.25
TMEM144-216ENST00000514558 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
TMEM144-216ENST00000514558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
TMEM144-216ENST00000514558 WIZO95785 1651 aa13.46□□□□□ -0.25
TMEM144-216ENST00000514558 HMGXB3Q12766 1538 aa13.46□□□□□ -0.25
TMEM144-216ENST00000514558 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
TMEM144-216ENST00000514558 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
TMEM144-216ENST00000514558 UBTFP17480 764 aaKnown RBP13.34□□□□□ -0.27
TMEM144-216ENST00000514558 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
TMEM144-216ENST00000514558 TOP2AP11388 1531 aaKnown RBP13.31□□□□□ -0.28
TMEM144-216ENST00000514558 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
TMEM144-216ENST00000514558 DIEXFQ68CQ4 756 aaKnown RBP13.26□□□□□ -0.29
TMEM144-216ENST00000514558 CCDC88BA6NC98 1476 aa13.25□□□□□ -0.29
TMEM144-216ENST00000514558 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
TMEM144-216ENST00000514558 CENPBP07199 599 aaPredicted RBP13.24□□□□□ -0.29
TMEM144-216ENST00000514558 BIVM-ERCC5R4GMW8 1640 aa13.22□□□□□ -0.29
TMEM144-216ENST00000514558 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
TMEM144-216ENST00000514558 ACIN1Q9UKV3 1341 aaKnown RBP13.21□□□□□ -0.29
TMEM144-216ENST00000514558 SOGA1O94964 1423 aa13.2□□□□□ -0.3
TMEM144-216ENST00000514558 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
TMEM144-216ENST00000514558 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMEM144-216ENST00000514558 TNIKQ9UKE5 1360 aa13.16□□□□□ -0.3
TMEM144-216ENST00000514558 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
TMEM144-216ENST00000514558 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
TMEM144-216ENST00000514558 APLP2Q06481 763 aa13.14□□□□□ -0.31
TMEM144-216ENST00000514558 HNRNPUL2Q1KMD3 747 aaKnown RBP13.14□□□□□ -0.31
TMEM144-216ENST00000514558 EEA1Q15075 1411 aa13.12□□□□□ -0.31
TMEM144-216ENST00000514558 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
TMEM144-216ENST00000514558 NCAPD3P42695 1498 aa13.12□□□□□ -0.31
TMEM144-216ENST00000514558 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
TMEM144-216ENST00000514558 RUSC2Q8N2Y8 1516 aa13.1□□□□□ -0.31
TMEM144-216ENST00000514558 GOLGA3Q08378 1498 aa13.1□□□□□ -0.31
TMEM144-216ENST00000514558 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
TMEM144-216ENST00000514558 ATAD2BQ9ULI0 1458 aa13□□□□□ -0.33
TMEM144-216ENST00000514558 CLIP1P30622 1438 aa13□□□□□ -0.33
TMEM144-216ENST00000514558 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
TMEM144-216ENST00000514558 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
TMEM144-216ENST00000514558 MIER1Q8N108 512 aa12.91□□□□□ -0.34
TMEM144-216ENST00000514558 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.34
TMEM144-216ENST00000514558 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
TMEM144-216ENST00000514558 BAZ1BQ9UIG0 1483 aaKnown RBP12.89□□□□□ -0.35
TMEM144-216ENST00000514558 THOC2Q8NI27 1593 aaKnown RBP12.88□□□□□ -0.35
TMEM144-216ENST00000514558 KIF21BO75037 1637 aa12.86□□□□□ -0.35
TMEM144-216ENST00000514558 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
TMEM144-216ENST00000514558 TOP2BQ02880 1626 aa12.83□□□□□ -0.36
TMEM144-216ENST00000514558 ITGAEP38570 1179 aa12.8□□□□□ -0.36
TMEM144-216ENST00000514558 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
TMEM144-216ENST00000514558 TARBP1Q13395 1621 aaKnown RBP12.79□□□□□ -0.36
TMEM144-216ENST00000514558 LAMC3Q9Y6N6 1575 aa12.78□□□□□ -0.36
TMEM144-216ENST00000514558 CFTRP13569 1480 aa12.76□□□□□ -0.37
TMEM144-216ENST00000514558 ABCA5Q8WWZ7 1642 aa12.75□□□□□ -0.37
TMEM144-216ENST00000514558 MYT1Q01538 1121 aa12.72□□□□□ -0.37
TMEM144-216ENST00000514558 KANK4Q5T7N3 995 aaPredicted RBP12.72□□□□□ -0.37
TMEM144-216ENST00000514558 CLSPNQ9HAW4 1339 aa12.69□□□□□ -0.38
TMEM144-216ENST00000514558 DHX57Q6P158 1386 aaKnown RBP12.68□□□□□ -0.38
TMEM144-216ENST00000514558 KIF27Q86VH2 1401 aa12.67□□□□□ -0.38
TMEM144-216ENST00000514558 ATP1B4Q9UN42 357 aaPredicted RBP12.66□□□□□ -0.38
TMEM144-216ENST00000514558 WDR62O43379 1518 aa12.65□□□□□ -0.38
TMEM144-216ENST00000514558 ARAP1Q96P48 1450 aa12.65□□□□□ -0.38
TMEM144-216ENST00000514558 ERICH3Q5RHP9 1530 aa12.64□□□□□ -0.39
TMEM144-216ENST00000514558 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
TMEM144-216ENST00000514558 CCNB3Q8WWL7 1395 aa12.61□□□□□ -0.39
TMEM144-216ENST00000514558 FAM50AQ14320 339 aaKnown RBP12.59□□□□□ -0.39
TMEM144-216ENST00000514558 LRRIQ1Q96JM4 1722 aa12.58□□□□□ -0.4
TMEM144-216ENST00000514558 CUX1P39880 1505 aa12.57□□□□□ -0.4
TMEM144-216ENST00000514558 PBRM1Q86U86 1689 aa12.56□□□□□ -0.4
TMEM144-216ENST00000514558 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms