RNA–Protein interactions for RNA: ENST00000254051.10

TNS4-201, Transcript of tensin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNS4, Length 4,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS4-201ENST00000254051 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
TNS4-201ENST00000254051 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
TNS4-201ENST00000254051 CCDC180Q9P1Z9 1646 aa13.99□□□□□ -0.17
TNS4-201ENST00000254051 SHROOM4Q9ULL8 1493 aa13.9□□□□□ -0.18
TNS4-201ENST00000254051 ZCCHC6Q5VYS8 1495 aaKnown RBP13.76□□□□□ -0.21
TNS4-201ENST00000254051 ABCC9O60706 1549 aa13.68□□□□□ -0.22
TNS4-201ENST00000254051 SUPT5HO00267 1087 aaKnown RBP13.65□□□□□ -0.22
TNS4-201ENST00000254051 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
TNS4-201ENST00000254051 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
TNS4-201ENST00000254051 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNS4-201ENST00000254051 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.31
TNS4-201ENST00000254051 MYT1Q01538 1121 aa13.07□□□□□ -0.32
TNS4-201ENST00000254051 RB1CC1Q8TDY2 1594 aa13.04□□□□□ -0.32
TNS4-201ENST00000254051 NACADO15069 1562 aa13.03□□□□□ -0.32
TNS4-201ENST00000254051 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
TNS4-201ENST00000254051 CHIC1Q5VXU3 224 aa12.81□□□□□ -0.36
TNS4-201ENST00000254051 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
TNS4-201ENST00000254051 TRIM41Q8WV44 630 aa12.77□□□□□ -0.36
TNS4-201ENST00000254051 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
TNS4-201ENST00000254051 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
TNS4-201ENST00000254051 CECR2Q9BXF3 1484 aa12.71□□□□□ -0.37
TNS4-201ENST00000254051 UNC13AQ9UPW8 1703 aa12.71□□□□□ -0.38
TNS4-201ENST00000254051 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
TNS4-201ENST00000254051 WIZO95785 1651 aa12.6□□□□□ -0.39
TNS4-201ENST00000254051 BICRAQ9NZM4 1560 aa12.49□□□□□ -0.41
TNS4-201ENST00000254051 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
TNS4-201ENST00000254051 SMARCA4P51532 1647 aa12.46□□□□□ -0.41
TNS4-201ENST00000254051 UBTFP17480 764 aaKnown RBP12.43□□□□□ -0.42
TNS4-201ENST00000254051 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
TNS4-201ENST00000254051 RANGAP1P46060 587 aaPredicted RBP12.4□□□□□ -0.42
TNS4-201ENST00000254051 LOC105371045A0A1W2PR82 267 aa12.4□□□□□ -0.42
TNS4-201ENST00000254051 APLP2Q06481 763 aa12.39□□□□□ -0.43
TNS4-201ENST00000254051 BAZ1BQ9UIG0 1483 aaKnown RBP12.39□□□□□ -0.43
TNS4-201ENST00000254051 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
TNS4-201ENST00000254051 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
TNS4-201ENST00000254051 CCDC88BA6NC98 1476 aa12.29□□□□□ -0.44
TNS4-201ENST00000254051 TTBK1Q5TCY1 1321 aaPredicted RBP12.29□□□□□ -0.44
TNS4-201ENST00000254051 PEG3Q9GZU2 1588 aa12.28□□□□□ -0.44
TNS4-201ENST00000254051 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
TNS4-201ENST00000254051 ERICH6Q7L0X2 663 aa12.21□□□□□ -0.46
TNS4-201ENST00000254051 ABCC8Q09428 1581 aa12.21□□□□□ -0.46
TNS4-201ENST00000254051 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
TNS4-201ENST00000254051 PRKCSHP14314 528 aaPredicted RBP12.16□□□□□ -0.46
TNS4-201ENST00000254051 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
TNS4-201ENST00000254051 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
TNS4-201ENST00000254051 FBLN2P98095 1184 aa12.08□□□□□ -0.48
TNS4-201ENST00000254051 WRNQ14191 1432 aaPredicted RBP eCLIP12.08□□□□□ -0.48
TNS4-201ENST00000254051 NCAPD3P42695 1498 aa12.05□□□□□ -0.48
TNS4-201ENST00000254051 BCL11AQ9H165 835 aa12.04□□□□□ -0.48
TNS4-201ENST00000254051 HRCP23327 699 aa12.03□□□□□ -0.48
TNS4-201ENST00000254051 PPARGC1BQ86YN6 1023 aaKnown RBP12.03□□□□□ -0.48
TNS4-201ENST00000254051 SOGA1O94964 1423 aa12.02□□□□□ -0.49
TNS4-201ENST00000254051 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
TNS4-201ENST00000254051 CADPSQ9ULU8 1353 aa12.01□□□□□ -0.49
TNS4-201ENST00000254051 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
TNS4-201ENST00000254051 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
TNS4-201ENST00000254051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.99□□□□□ -0.49
TNS4-201ENST00000254051 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
TNS4-201ENST00000254051 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
TNS4-201ENST00000254051 HMGXB3Q12766 1538 aa11.96□□□□□ -0.49
TNS4-201ENST00000254051 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.5
TNS4-201ENST00000254051 TRIM26Q12899 539 aaPredicted RBP11.96□□□□□ -0.5
TNS4-201ENST00000254051 CENPBP07199 599 aaPredicted RBP11.93□□□□□ -0.5
TNS4-201ENST00000254051 EEA1Q15075 1411 aa11.91□□□□□ -0.5
TNS4-201ENST00000254051 KIF27Q86VH2 1401 aa11.9□□□□□ -0.51
TNS4-201ENST00000254051 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
TNS4-201ENST00000254051 P3H3Q8IVL6 736 aa11.88□□□□□ -0.51
TNS4-201ENST00000254051 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
TNS4-201ENST00000254051 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
TNS4-201ENST00000254051 TOP2BQ02880 1626 aa11.87□□□□□ -0.51
TNS4-201ENST00000254051 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
TNS4-201ENST00000254051 DNAJC5BQ9UF47 199 aa11.85□□□□□ -0.51
TNS4-201ENST00000254051 FANCD2Q9BXW9 1451 aa11.84□□□□□ -0.51
TNS4-201ENST00000254051 CEP162Q5TB80 1403 aa11.84□□□□□ -0.51
TNS4-201ENST00000254051 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
TNS4-201ENST00000254051 TNIKQ9UKE5 1360 aa11.83□□□□□ -0.52
TNS4-201ENST00000254051 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
TNS4-201ENST00000254051 KIF21BO75037 1637 aa11.82□□□□□ -0.52
TNS4-201ENST00000254051 CUX2O14529 1486 aa11.82□□□□□ -0.52
TNS4-201ENST00000254051 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
TNS4-201ENST00000254051 CFTRP13569 1480 aa11.81□□□□□ -0.52
TNS4-201ENST00000254051 CUX1P39880 1505 aa11.79□□□□□ -0.52
TNS4-201ENST00000254051 GOLGA3Q08378 1498 aa11.79□□□□□ -0.52
TNS4-201ENST00000254051 ITGAEP38570 1179 aa11.78□□□□□ -0.52
TNS4-201ENST00000254051 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
TNS4-201ENST00000254051 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
TNS4-201ENST00000254051 RAPGEF2Q9Y4G8 1499 aa11.74□□□□□ -0.53
TNS4-201ENST00000254051 NESP48681 1621 aa11.74□□□□□ -0.53
TNS4-201ENST00000254051 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
TNS4-201ENST00000254051 ARID3CA6NKF2 412 aa11.73□□□□□ -0.53
TNS4-201ENST00000254051 CLIP1P30622 1438 aa11.72□□□□□ -0.53
TNS4-201ENST00000254051 FAM50AQ14320 339 aaKnown RBP11.68□□□□□ -0.54
TNS4-201ENST00000254051 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
TNS4-201ENST00000254051 PRXQ9BXM0 1461 aa11.68□□□□□ -0.54
TNS4-201ENST00000254051 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
TNS4-201ENST00000254051 FGD5Q6ZNL6 1462 aa11.66□□□□□ -0.54
TNS4-201ENST00000254051 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.55
TNS4-201ENST00000254051 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
TNS4-201ENST00000254051 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
TNS4-201ENST00000254051 LAMC3Q9Y6N6 1575 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms