RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
SPOCK1-201ENST00000282223 PPARGC1BQ86YN6 1023 aaKnown RBP13□□□□□ -0.33
SPOCK1-201ENST00000282223 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.34
SPOCK1-201ENST00000282223 HRCP23327 699 aa12.93□□□□□ -0.34
SPOCK1-201ENST00000282223 MYT1Q01538 1121 aa12.78□□□□□ -0.36
SPOCK1-201ENST00000282223 SUPT5HO00267 1087 aaKnown RBP12.65□□□□□ -0.38
SPOCK1-201ENST00000282223 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.41
SPOCK1-201ENST00000282223 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
SPOCK1-201ENST00000282223 NISCHQ9Y2I1 1504 aa12.33□□□□□ -0.44
SPOCK1-201ENST00000282223 GTF3C3Q9Y5Q9 886 aa12.31□□□□□ -0.44
SPOCK1-201ENST00000282223 CENPBP07199 599 aaPredicted RBP12.26□□□□□ -0.45
SPOCK1-201ENST00000282223 YTHDC1Q96MU7 727 aaKnown RBP12.24□□□□□ -0.45
SPOCK1-201ENST00000282223 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.46
SPOCK1-201ENST00000282223 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
SPOCK1-201ENST00000282223 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.47
SPOCK1-201ENST00000282223 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
SPOCK1-201ENST00000282223 LOC105371045A0A1W2PR82 267 aa12.08□□□□□ -0.48
SPOCK1-201ENST00000282223 TRIM26Q12899 539 aaPredicted RBP12.05□□□□□ -0.48
SPOCK1-201ENST00000282223 BCL11AQ9H165 835 aa12.04□□□□□ -0.48
SPOCK1-201ENST00000282223 CHIC1Q5VXU3 224 aa11.95□□□□□ -0.5
SPOCK1-201ENST00000282223 CCER1Q8TC90 406 aaPredicted RBP11.95□□□□□ -0.5
SPOCK1-201ENST00000282223 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
SPOCK1-201ENST00000282223 DIEXFQ68CQ4 756 aaKnown RBP11.91□□□□□ -0.5
SPOCK1-201ENST00000282223 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
SPOCK1-201ENST00000282223 FAM9AQ8IZU1 332 aaPredicted RBP11.88□□□□□ -0.51
SPOCK1-201ENST00000282223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
SPOCK1-201ENST00000282223 PRKCSHP14314 528 aaPredicted RBP11.76□□□□□ -0.53
SPOCK1-201ENST00000282223 ERICH6Q7L0X2 663 aa11.74□□□□□ -0.53
SPOCK1-201ENST00000282223 MYO15BQ96JP2 1530 aa11.71□□□□□ -0.54
SPOCK1-201ENST00000282223 ANP32EQ9BTT0 268 aa11.7□□□□□ -0.54
SPOCK1-201ENST00000282223 BCANQ96GW7 911 aa11.69□□□□□ -0.54
SPOCK1-201ENST00000282223 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
SPOCK1-201ENST00000282223 MIER1Q8N108 512 aa11.49□□□□□ -0.57
SPOCK1-201ENST00000282223 ZNF316A6NFI3 1004 aaPredicted RBP11.44□□□□□ -0.58
SPOCK1-201ENST00000282223 DCAF1Q9Y4B6 1507 aa11.44□□□□□ -0.58
SPOCK1-201ENST00000282223 NEFLP07196 543 aa11.42□□□□□ -0.58
SPOCK1-201ENST00000282223 TRIM41Q8WV44 630 aa11.42□□□□□ -0.58
SPOCK1-201ENST00000282223 TSHZ2Q9NRE2 1034 aa11.41□□□□□ -0.58
SPOCK1-201ENST00000282223 CCDC136Q96JN2 1154 aa11.37□□□□□ -0.59
SPOCK1-201ENST00000282223 EIF5BO60841 1220 aaKnown RBP11.37□□□□□ -0.59
SPOCK1-201ENST00000282223 SUPT16HQ9Y5B9 1047 aaKnown RBP11.37□□□□□ -0.59
SPOCK1-201ENST00000282223 ANO8Q9HCE9 1232 aaPredicted RBP11.36□□□□□ -0.59
SPOCK1-201ENST00000282223 ITGAEP38570 1179 aa11.35□□□□□ -0.59
SPOCK1-201ENST00000282223 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
SPOCK1-201ENST00000282223 FKBP8Q14318 412 aa11.32□□□□□ -0.6
SPOCK1-201ENST00000282223 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
SPOCK1-201ENST00000282223 NBR1Q14596 966 aa11.29□□□□□ -0.6
SPOCK1-201ENST00000282223 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
SPOCK1-201ENST00000282223 RBM19Q9Y4C8 960 aaKnown RBP11.22□□□□□ -0.61
SPOCK1-201ENST00000282223 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
SPOCK1-201ENST00000282223 DEKP35659 375 aaKnown RBP11.2□□□□□ -0.62
SPOCK1-201ENST00000282223 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
SPOCK1-201ENST00000282223 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
SPOCK1-201ENST00000282223 RANGAP1P46060 587 aaPredicted RBP11.15□□□□□ -0.62
SPOCK1-201ENST00000282223 APLP2Q06481 763 aa11.13□□□□□ -0.63
SPOCK1-201ENST00000282223 CDK11AQ9UQ88 783 aaPredicted RBP11.13□□□□□ -0.63
SPOCK1-201ENST00000282223 IRX6P78412 446 aaPredicted RBP11.11□□□□□ -0.63
SPOCK1-201ENST00000282223 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
SPOCK1-201ENST00000282223 CLSPNQ9HAW4 1339 aa11.07□□□□□ -0.64
SPOCK1-201ENST00000282223 UBTFP17480 764 aaKnown RBP11.03□□□□□ -0.64
SPOCK1-201ENST00000282223 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
SPOCK1-201ENST00000282223 KCNH8Q96L42 1107 aa10.97□□□□□ -0.65
SPOCK1-201ENST00000282223 MSH5O43196 834 aa10.96□□□□□ -0.65
SPOCK1-201ENST00000282223 IL27Q8NEV9 243 aa10.96□□□□□ -0.66
SPOCK1-201ENST00000282223 NPM2Q86SE8 214 aaKnown RBP10.95□□□□□ -0.66
SPOCK1-201ENST00000282223 CNGB1Q14028 1251 aaPredicted RBP10.95□□□□□ -0.66
SPOCK1-201ENST00000282223 DDX10Q13206 875 aaKnown RBP10.92□□□□□ -0.66
SPOCK1-201ENST00000282223 TIMELESSQ9UNS1 1208 aa10.89□□□□□ -0.67
SPOCK1-201ENST00000282223 HIRIP3Q9BW71 556 aaPredicted RBP10.87□□□□□ -0.67
SPOCK1-201ENST00000282223 ANP32AP39687 249 aaKnown RBP10.86□□□□□ -0.67
SPOCK1-201ENST00000282223 ZBTB47Q9UFB7 747 aaPredicted RBP10.86□□□□□ -0.67
SPOCK1-201ENST00000282223 NOP58Q9Y2X3 529 aaKnown RBP10.85□□□□□ -0.67
SPOCK1-201ENST00000282223 PKNOX2Q96KN3 472 aa10.84□□□□□ -0.67
SPOCK1-201ENST00000282223 LAS1LQ9Y4W2 734 aaKnown RBP10.84□□□□□ -0.67
SPOCK1-201ENST00000282223 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
SPOCK1-201ENST00000282223 GLIPR1L2Q4G1C9 344 aa10.82□□□□□ -0.68
SPOCK1-201ENST00000282223 UBE2Q2Q8WVN8 375 aa10.8□□□□□ -0.68
SPOCK1-201ENST00000282223 DAXXQ9UER7 740 aaPredicted RBP10.8□□□□□ -0.68
SPOCK1-201ENST00000282223 ANP32CO43423 234 aa10.8□□□□□ -0.68
SPOCK1-201ENST00000282223 B4GALNT3Q6L9W6 998 aa10.8□□□□□ -0.68
SPOCK1-201ENST00000282223 ERICH6BQ5W0A0 696 aa10.79□□□□□ -0.68
SPOCK1-201ENST00000282223 VSIG10Q8N0Z9 540 aa10.79□□□□□ -0.68
SPOCK1-201ENST00000282223 ARXQ96QS3 562 aa10.78□□□□□ -0.68
SPOCK1-201ENST00000282223 NEFMP07197 916 aa10.78□□□□□ -0.68
SPOCK1-201ENST00000282223 PLEKHG5O94827 1062 aa10.76□□□□□ -0.69
SPOCK1-201ENST00000282223 SENP3-EIF4A1A0A087X0R7 540 aa10.75□□□□□ -0.69
SPOCK1-201ENST00000282223 PAK3O75914 559 aaPredicted RBP10.75□□□□□ -0.69
SPOCK1-201ENST00000282223 PODXL2Q9NZ53 605 aa10.75□□□□□ -0.69
SPOCK1-201ENST00000282223 FANCIQ9NVI1 1328 aa10.73□□□□□ -0.69
SPOCK1-201ENST00000282223 A0A0U1RQG5 324 aaPredicted RBP10.71□□□□□ -0.69
SPOCK1-201ENST00000282223 ARID4BQ4LE39 1312 aaPredicted RBP10.71□□□□□ -0.69
SPOCK1-201ENST00000282223 BRPF3Q9ULD4 1205 aa10.68□□□□□ -0.7
SPOCK1-201ENST00000282223 FAM9BQ8IZU0 186 aa10.65□□□□□ -0.7
SPOCK1-201ENST00000282223 POLR3GLQ9BT43 218 aa10.65□□□□□ -0.7
SPOCK1-201ENST00000282223 NAP1L5Q96NT1 182 aaPredicted RBP10.63□□□□□ -0.71
SPOCK1-201ENST00000282223 PPP4R2Q9NY27 417 aa10.62□□□□□ -0.71
SPOCK1-201ENST00000282223 SIN3AQ96ST3 1273 aa10.58□□□□□ -0.72
SPOCK1-201ENST00000282223 IPO9Q96P70 1041 aaKnown RBP10.58□□□□□ -0.72
SPOCK1-201ENST00000282223 ATP1B4Q9UN42 357 aaPredicted RBP10.58□□□□□ -0.72
SPOCK1-201ENST00000282223 ZMYND15Q9H091 742 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms